RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
CHD3-206ENST00000452447 GLB1P16278 677 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 GPR1P46091 355 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 CDK3Q00526 305 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 DSC2Q02487 901 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 PTPRRQ15256 657 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 ODF2Q5BJF6 829 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 LRRC66Q68CR7 880 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 ALG1LQ6GMV1 187 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 FOXR1Q6PIV2 292 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 PQLC3Q8N755 202 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 GPR156Q8NFN8 814 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.87□□□□□ -0.35
CHD3-206ENST00000452447 RAPGEF5Q92565 580 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 NAF1Q96HR8 494 aaKnown RBP12.87□□□□□ -0.35
CHD3-206ENST00000452447 RNF157Q96PX1 679 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 CHP1Q99653 195 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 MAK16Q9BXY0 300 aaKnown RBP12.87□□□□□ -0.35
CHD3-206ENST00000452447 SPTLC3Q9NUV7 552 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 DNPEPQ9ULA0 475 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
CHD3-206ENST00000452447 A0A0J9YYE9 177 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 B4DGG1 531 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 NTN3O00634 580 aaPredicted RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 FZD6O60353 706 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 MFAP3LO75121 409 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TRBC1P01850 177 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 RPLP0P05388 317 aaKnown RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 ZNF30P17039 623 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TEAD1P28347 426 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CCL7P80098 99 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 DPTQ07507 201 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHD3-206ENST00000452447 IGF2-ASQ6U949 168 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CNGA4Q8IV77 575 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 SPACA3Q8IXA5 215 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CCDC13Q8IYE1 715 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 ARL14Q8N4G2 192 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CCL4L1Q8NHW4 92 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 WDR36Q8NI36 951 aaKnown RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 KIAA1524Q8TCG1 905 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 AP2M1Q96CW1 435 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 SLC46A1Q96NT5 459 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TDRD1Q9BXT4 1180 aaKnown RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 ASCL3Q9NQ33 180 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TRNAU1APQ9NX07 287 aaKnown RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 DTLQ9NZJ0 730 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CD84Q9UIB8 345 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CHKBQ9Y259 395 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 BAHCC1Q9P281 2608 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 EIF4E1BA6NMX2 242 aaKnown RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 JCHAINP01591 159 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 HLA-DQB2P05538 268 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CEACAM5P06731 702 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 PYGLP06737 847 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 PNLIPP16233 465 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 GNPDA1P46926 289 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 PTSQ03393 145 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TLE3Q04726 772 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 SLC10A2Q12908 348 aaPredicted RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 C14orf28Q4W4Y0 310 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CERCAMQ5T4B2 595 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 BROXQ5VW32 411 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 OGFOD3Q6PK18 319 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 TECPR1Q7Z6L1 1165 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 CCNJLQ8IV13 435 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 Q8N9G6 341 aaPredicted RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 KCNE4Q8WWG9 221 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 FCRL3Q96P31 734 aaPredicted RBP12.86□□□□□ -0.35
CHD3-206ENST00000452447 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 LRRN3Q9H3W5 708 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 SUFUQ9UMX1 484 aa12.86□□□□□ -0.35
CHD3-206ENST00000452447 A0A0U1RQS6 177 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 A0A1W2PQM1 296 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 CAPN8A6NHC0 703 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 D6RAR5 112 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 KCNK1O00180 336 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 APOL1O14791 398 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 NUDT21O43809 227 aaKnown RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 NOBOXO60393 691 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 PDX1P52945 283 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 RPL26P61254 145 aaKnown RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 PPIDQ08752 370 aaKnown RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 AP1B1Q10567 949 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms