RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 GRIA2P42262 883 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 MAGEA6P43360 314 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 RECQLP46063 649 aaPredicted RBP11.18□□□□□ -0.62
DDR1-239ENST00000452441 ZBTB6Q15916 424 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 UPP1Q16831 310 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 FBXO39Q8N4B4 442 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 FIG4Q92562 907 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 PBXIP1Q96AQ6 731 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 DNAJC28Q9NX36 388 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 SH3BP1Q9Y3L3 701 aa11.18□□□□□ -0.62
DDR1-239ENST00000452441 MAGEB16A2A368 324 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 IRAK2O43187 625 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 CABYRO75952 493 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ZBTB11O95625 1053 aaPredicted RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 ATP5F1P24539 256 aaPredicted RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 KCNK10P57789 538 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 RHOAP61586 193 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 NIPAL4Q0D2K0 466 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ARHGEF6Q15052 776 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 AP5B1Q2VPB7 878 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 MRNIPQ6NTE8 343 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 FBXL19Q6PCT2 694 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ARHGAP22Q7Z5H3 698 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 DHFR2Q86XF0 187 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 FBXO30Q8TB52 745 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 STN1Q9H668 368 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 MARCH4Q9P2E8 410 aaPredicted RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 PCDHB9Q9Y5E1 797 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.626e-6■■■■■ 122.4
DDR1-239ENST00000452441 A0A0D9SEW6 157 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ZCWPW2A0A1B0GU75 182 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ATP5C1P36542 298 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 CDK18Q07002 472 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 BFSP2Q13515 415 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 MORN1Q5T089 497 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 C17orf99Q6UX52 265 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 HERC6Q8IVU3 1022 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 FAM47BQ8NA70 645 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 CALML6Q8TD86 181 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 NUDT8Q8WV74 236 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 HIPK3Q9H422 1215 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 COQ10BQ9H8M1 238 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 OXSMQ9NWU1 459 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 HNRNPRO43390 633 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 SYNCRIPO60506 623 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 FYNP06241 537 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 MLNP12872 115 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 EEF1DP29692 281 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 SMAD3P84022 425 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 NOGQ13253 232 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 GTF2H3Q13889 308 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ARHGEF7Q14155 803 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 TSNQ15631 228 aaKnown RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 SZRD1Q7Z422 152 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 PCYOX1LQ8NBM8 494 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 GRIN3AQ8TCU5 1115 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDR1-239ENST00000452441 VAT1Q99536 393 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 C17orf80Q9BSJ5 609 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
DDR1-239ENST00000452441 EVLQ9UI08 416 aaPredicted RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 HEMK1Q9Y5R4 338 aaPredicted RBP11.17□□□□□ -0.62
DDR1-239ENST00000452441 GSNP06396 782 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 SLC35E2BP0CK96 405 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 PBLDP30039 288 aaPredicted RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 GKP32189 559 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 GLUD2P49448 558 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 PPIDQ08752 370 aaKnown RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 CEACAM7Q14002 265 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 CCDC81Q6ZN84 652 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 METTL6Q8TCB7 284 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 ANKRD49Q8WVL7 239 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 TSPAN17Q96FV3 270 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 HAUS8Q9BT25 410 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 HGH1Q9BTY7 390 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 ALG2Q9H553 416 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 OCEL1Q9H607 264 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 IGSF9Q9P2J2 1179 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 TRMT6Q9UJA5 497 aaKnown RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 HS3ST4Q9Y661 456 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 KLHL33A6NCF5 533 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 IPO13O94829 963 aaKnown RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 LRATO95237 230 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 SNRPB2P08579 225 aaKnown RBP11.16□□□□□ -0.62
DDR1-239ENST00000452441 FAM58BPP0C7Q3 252 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 CKBP12277 381 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 PHEXP78562 749 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 TLR1Q15399 786 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 PGM2L1Q6PCE3 622 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
DDR1-239ENST00000452441 CANT1Q8WVQ1 401 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms