RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 OR56A4Q8NGH8 313 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 CCDC3Q9BQI4 270 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 CLPBQ9H078 707 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 NT5MQ9NPB1 228 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 RCOR3Q9P2K3 495 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-208ENST00000451893 B4GALT6Q9UBX8 382 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 ZFHX4Q86UP3 3567 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 CACNA1GO43497 2377 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 CELA2BP08218 269 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 COMTP21964 271 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 RBMS1P29558 406 aaKnown RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 VIPR1P32241 457 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 PCBP4P57723 403 aaKnown RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 KIAA1024LP59773 190 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 SLC25A11Q02978 314 aaKnown RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 RALGDSQ12967 914 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 ARMC12Q5T9G4 340 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 TXNRD3NBQ6F5E7 133 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 TIGD7Q6NT04 549 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 LVRNQ6Q4G3 990 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 USP45Q70EL2 814 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 ZNF572Q7Z3I7 529 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 PLA2G15Q8NCC3 412 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 SNIP1Q8TAD8 396 aaKnown RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 NAF1Q96HR8 494 aaKnown RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 CARD9Q9H257 536 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 SUDS3Q9H7L9 328 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 POLR1BQ9H9Y6 1135 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 KCTD5Q9NXV2 234 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 PNMA8BQ9ULN7 279 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 PHTF1Q9UMS5 762 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.67■■□□□ 1.06
C9orf3-208ENST00000451893 ZZEF1O43149 2961 aa21.67■■□□□ 1.06
C9orf3-208ENST00000451893 ASXL3Q9C0F0 2248 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 RP1P56715 2156 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CTAGE15A4D2H0 777 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 EFCAB8A8MWE9 144 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 TRAFD1O14545 582 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-208ENST00000451893 SPOPO43791 374 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 MAFKO60675 156 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 TCEA3O75764 348 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CTAGE8P0CG41 777 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 EPHB1P54762 984 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 ISXQ2M1V0 245 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 ODF2Q5BJF6 829 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 RALGPS1Q5JS13 557 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 PERM1Q5SV97 790 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 BROXQ5VW32 411 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CTAGE6Q86UF2 777 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CREG2Q8IUH2 290 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 LRRC49Q8IUZ0 686 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CTAGE4Q8IX94 777 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.66■■□□□ 1.06
C9orf3-208ENST00000451893 GRAMD1AQ96CP6 724 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 PDXPQ96GD0 296 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 ZNF578Q96N58 590 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-208ENST00000451893 MGME1Q9BQP7 344 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CARD6Q9BX69 1037 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 NOD2Q9HC29 1040 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 PHPT1Q9NRX4 125 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-208ENST00000451893 THSD1Q9NS62 852 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 WDR70Q9NW82 654 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 TTC7AQ9ULT0 858 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-208ENST00000451893 PCDHA3Q9Y5H8 950 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 LRP4O75096 1905 aa21.66■■□□□ 1.06
C9orf3-208ENST00000451893 CTIFO43310 598 aaKnown RBP21.65■■□□□ 1.06
C9orf3-208ENST00000451893 KRT7P08729 469 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 CA4P22748 312 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 ITPKBP27987 946 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 CTNNA1P35221 906 aaKnown RBP21.65■■□□□ 1.06
C9orf3-208ENST00000451893 MMRN1Q13201 1228 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 BIRC2Q13490 618 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 CCDC181Q5TID7 509 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 RAET1GQ6H3X3 334 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 KYQ8NBH2 561 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 ZNF248Q8NDW4 579 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 OR6C4Q8NGE1 309 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 FUBP1Q96AE4 644 aaKnown RBP21.65■■□□□ 1.06
C9orf3-208ENST00000451893 POLR1EQ9GZS1 481 aaKnown RBP21.65■■□□□ 1.06
C9orf3-208ENST00000451893 CYP4F12Q9HCS2 524 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 SATB2Q9UPW6 733 aa21.65■■□□□ 1.06
C9orf3-208ENST00000451893 DDX3YO15523 660 aaKnown RBP21.64■■□□□ 1.05
C9orf3-208ENST00000451893 MFSD11O43934 449 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 LSSP48449 732 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 PDK2Q15119 407 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 CNGA3Q16281 694 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 LRRC38Q5VT99 294 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 PNCKQ6P2M8 343 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 FAM46DQ8NEK8 389 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 ACTRT1Q8TDG2 376 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 CCDC74AQ96AQ1 378 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 ATXN7L3BQ96GX2 97 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 GFM1Q96RP9 751 aaKnown RBP21.64■■□□□ 1.05
C9orf3-208ENST00000451893 NAP1L3Q99457 506 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-208ENST00000451893 SEMA3CQ99985 751 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 DPEP2Q9H4A9 486 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 DGKBQ9Y6T7 804 aa21.64■■□□□ 1.05
C9orf3-208ENST00000451893 B4DGG1 531 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 HTRA2O43464 458 aaPredicted RBP21.63■■□□□ 1.05
C9orf3-208ENST00000451893 PSTPIP1O43586 416 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms