RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ITGA9Q13797 1035 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 TEAD2Q15562 447 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 LCA5Q86VQ0 697 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PPHLN1Q8NEY8 458 aaKnown RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 ITFG1Q8TB96 612 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PHOSPHO2Q8TCD6 241 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 ACTR5Q9H9F9 607 aaPredicted RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 CD248Q9HCU0 757 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 HEY2Q9UBP5 337 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 ANKRD6Q9Y2G4 727 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 NPIPB15A6NHN6 443 aaPredicted RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 SHISA7A6NL88 538 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 ALPIP09923 528 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PRR35P0CG20 571 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 EPORP19235 508 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 SLC11A2P49281 568 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PRKAA2P54646 552 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 POU4F1Q01851 419 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PLEKHG6Q3KR16 790 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 TSPAN33Q86UF1 283 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 C10orf67Q8IYJ2 551 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PPP1R2P1Q96PQ5 205 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 YME1L1Q96TA2 773 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 MCOLN1Q9GZU1 580 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 TAS2R1Q9NYW7 299 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP46-202ENST00000451218 CFAP97Q9P2B7 532 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 DCTN4Q9UJW0 460 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 SLC39A10Q9ULF5 831 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 AP3B1O00203 1094 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 WFS1O76024 890 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 RHOP08100 348 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 C7P10643 843 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 NDUFV2P19404 249 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 HNRNPH1P31943 449 aaKnown RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 ALDH1A3P47895 512 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 FOXA1P55317 472 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 RALGDSQ12967 914 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 RIPK1Q13546 671 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 UNC50Q53HI1 259 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 MICALL1Q8N3F8 863 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 CPSF7Q8N684 471 aaKnown RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 PIWIL2Q8TC59 973 aaKnown RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 C3orf30Q96M34 536 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 PAIP2Q9BPZ3 127 aaKnown RBP6.58□□□□□ -1.36
USP46-202ENST00000451218 PLCD4Q9BRC7 762 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 CDH19Q9H159 772 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 POPDC3Q9HBV1 291 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 ZBTB26Q9HCK0 441 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 MAN1C1Q9NR34 630 aa6.58□□□□□ -1.36
USP46-202ENST00000451218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 FCHO1O14526 889 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 PEX11AO75192 247 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 CPA3P15088 417 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 RAG1P15918 1043 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 AQP5P55064 265 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 SLC12A1Q13621 1099 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 C2orf27AQ580R0 203 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 ARL13AQ5H913 290 aaPredicted RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 HHATQ5VTY9 493 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 LIPMQ5VYY2 423 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 PGM2L1Q6PCE3 622 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 FRMD7Q6ZUT3 714 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 PTAR1Q7Z6K3 402 aaPredicted RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 ARID3BQ8IVW6 561 aaPredicted RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 FAM13CQ8NE31 585 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 RDH11Q8TC12 318 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 CNDP1Q96KN2 507 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 REPIN1Q9BWE0 567 aaKnown RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 BOCQ9BWV1 1114 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 TBC1D10AQ9BXI6 508 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 FSD1LQ9BXM9 530 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 PLK2Q9NYY3 685 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 SAMD15Q9P1V8 674 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 SEPT3Q9UH03 358 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 SUN2Q9UH99 717 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 CDYLQ9Y232 598 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 TP53BP1Q12888 1972 aaPredicted RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 PRR5-ARHGAP8B1AHC4 643 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 TMEM114B3SHH9 223 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 CXCL14O95715 111 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 FGBP02675 491 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 RHOCP08134 193 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 C1SP09871 688 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 HSPA1AP0DMV8 641 aaKnown RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 HSPA1BP0DMV9 641 aaKnown RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 MBL2P11226 248 aaPredicted RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 OGNP20774 298 aaKnown RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 HMGCLP35914 325 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 CD151P48509 253 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 IRX4P78413 519 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 ARHGAP8P85298 464 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 KHDC1Q4VXA5 237 aaKnown RBP6.57□□□□□ -1.36
USP46-202ENST00000451218 GPR158Q5T848 1215 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 CAMK1DQ8IU85 385 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 OR2A12Q8NGT7 310 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 WDR60Q8WVS4 1066 aa6.57□□□□□ -1.36
USP46-202ENST00000451218 COG4Q9H9E3 785 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms