RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GDPD4Q6W3E5 623 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 YAF2Q8IY57 180 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 ELSPBP1Q96BH3 223 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 MCCC1Q96RQ3 725 aaPredicted RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 NDNQ99608 321 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 HEPHQ9BQS7 1158 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 MECRQ9BV79 373 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 ZNF358Q9NW07 568 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 PLA2G4CQ9UP65 541 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 VPS9D1Q9Y2B5 631 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 STARD13Q9Y3M8 1113 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 SPTBN5Q9NRC6 3674 aaKnown RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 A0A0U1RQS6 177 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 PSMC3P17980 439 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 ST8SIA6P61647 398 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 POLR2LP62875 67 aaKnown RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 IRX4P78413 519 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 XIAPP98170 497 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 RUNX3Q13761 415 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 EIF4HQ15056 248 aaKnown RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 FAM45BPQ6NSW5 357 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 USP45Q70EL2 814 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 CCDC91Q7Z6B0 441 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 SPATS2Q86XZ4 545 aaKnown RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 CENPLQ8N0S6 344 aaPredicted RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 KDM1BQ8NB78 822 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 FAM45AQ8TCE6 357 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 NXPE3Q969Y0 559 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 TSNARE1Q96NA8 513 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 OLFM1Q99784 485 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 NMRAL1Q9HBL8 299 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 CRYL1Q9Y2S2 319 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 DOCK8Q8NF50 2099 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 PRRT4C9JH25 899 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 PFDN6O15212 129 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 IL1BP01584 269 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 APOA4P06727 396 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 MTHFRP42898 656 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 TTPAP49638 278 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 PGGT1BP53609 377 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 MESP2Q0VG99 397 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 ZNF460Q14592 562 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 AARS2Q5JTZ9 985 aaKnown RBP14.23□□□□□ -0.13
USP39-207ENST00000450066 RNF187Q5TA31 235 aaPredicted RBP14.23□□□□□ -0.13
USP39-207ENST00000450066 ATG16L1Q676U5 607 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 CGB2Q6NT52 195 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 ZNF549Q6P9A3 640 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 BRAT1Q6PJG6 821 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 TPRG1Q6ZUI0 275 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 SPATA21Q7Z572 469 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 ANKS4BQ8N8V4 417 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 CCDC197Q8NCU1 140 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 LPGAT1Q92604 370 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 LRIG1Q96JA1 1093 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 OSBPL1AQ9BXW6 950 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 PLA2G2FQ9BZM2 168 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 COPG2Q9UBF2 871 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 WASF2Q9Y6W5 498 aa14.23□□□□□ -0.13
USP39-207ENST00000450066 NPIPB15A6NHN6 443 aaPredicted RBP14.22□□□□□ -0.13
USP39-207ENST00000450066 KLHL2O95198 593 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 CLDN7O95471 211 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 PRSS56P0CW18 603 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 CPA3P15088 417 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
USP39-207ENST00000450066 CACNG1Q06432 222 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 GRM2Q14416 872 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 PCLAFQ15004 111 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 TSNAXIP1Q2TAA8 658 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 CRTC1Q6UUV9 634 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 PIANPQ8IYJ0 282 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 PHTF2Q8N3S3 785 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 GRIN3AQ8TCU5 1115 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 KCTD4Q8WVF5 259 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 KLHL32Q96NJ5 620 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 TSSK1BQ9BXA7 367 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 BRD9Q9H8M2 597 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 RUVBL2Q9Y230 463 aaKnown RBP14.22□□□□□ -0.13
USP39-207ENST00000450066 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
USP39-207ENST00000450066 NDUFS3O75489 264 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 ECI2O75521 394 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 LEFTY1O75610 366 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 ALDH3A1P30838 453 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 SLC26A3P40879 764 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 CDKN2DP55273 166 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 ITIH4Q14624 930 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 CHI3L2Q15782 390 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 ZRANB3Q5FWF4 1079 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 PSAPL1Q6NUJ1 521 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 PARM1Q6UWI2 310 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 OTOAQ7RTW8 1153 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 TBC1D1Q86TI0 1168 aaPredicted RBP14.22□□□□□ -0.13
USP39-207ENST00000450066 CBARPQ8N350 705 aaPredicted RBP14.22□□□□□ -0.13
USP39-207ENST00000450066 RDH11Q8TC12 318 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 FGF14Q92915 247 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 GPR78Q96P69 363 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms