RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SUDS3Q9H7L9 328 aaPredicted RBP9.68□□□□□ -0.86
RFC4-210ENST00000449502 KCNK12Q9HB15 430 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 TRPV5Q9NQA5 729 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 SNX15Q9NRS6 342 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 INTS10Q9NVR2 710 aaKnown RBP9.68□□□□□ -0.86
RFC4-210ENST00000449502 CACNA2D2Q9NY47 1150 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 IL17CQ9P0M4 197 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 B4GALT6Q9UBX8 382 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 CRLS1Q9UJA2 301 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 CORO1CQ9ULV4 474 aaPredicted RBP9.68□□□□□ -0.86
RFC4-210ENST00000449502 ANKRD6Q9Y2G4 727 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 MTO1Q9Y2Z2 717 aaKnown RBP9.68□□□□□ -0.86
RFC4-210ENST00000449502 STON1Q9Y6Q2 735 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 WASF2Q9Y6W5 498 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 PIAS3Q9Y6X2 628 aa9.68□□□□□ -0.86
RFC4-210ENST00000449502 A0A087X1B8 175 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 A0A096LPK6 155 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 GLYATL1P3A0A0U1RQE8 302 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 NPIPB15A6NHN6 443 aaPredicted RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 C16orf96A6NNT2 1141 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ARNTLO00327 626 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 RFPL1O75677 317 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 HAUS5O94927 633 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 HNRNPLP14866 589 aaKnown RBP eCLIP9.67□□□□□ -0.86
RFC4-210ENST00000449502 TIMP2P16035 220 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 STMN1P16949 149 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 DRD1P21728 446 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 CTHP32929 405 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 CRHR1P34998 444 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 RPA3P35244 121 aaPredicted RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 TIE1P35590 1138 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 CCNFP41002 786 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 IL12RB1P42701 662 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 WASP42768 502 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ABCG1P45844 678 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 LEPRP48357 1165 aaKnown RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 PSMD8P48556 350 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 SUOXP51687 545 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 RAB10P61026 200 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ELP6Q0PNE2 266 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ZNF284Q2VY69 593 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 C9orf64Q5T6V5 341 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 NAIF1Q69YI7 327 aaPredicted RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 FAM45BPQ6NSW5 357 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 FAM151BQ6UXP7 276 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 CERS6Q6ZMG9 384 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 CCDC91Q7Z6B0 441 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 LDB1Q86U70 411 aaPredicted RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 ZSWIM9Q86XI8 627 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 MMAAQ8IVH4 418 aaKnown RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 SLC41A1Q8IVJ1 513 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 TRIM42Q8IWZ5 723 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 CBARPQ8N350 705 aaPredicted RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 SLC44A3Q8N4M1 653 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 DEFB123Q8N688 67 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 PIP4K2CQ8TBX8 421 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 FAM45AQ8TCE6 357 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 TCP10LQ8TDR4 215 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 GANCQ8TET4 914 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ULK4Q96C45 1275 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 SCYL1Q96KG9 808 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 MCCC1Q96RQ3 725 aaPredicted RBP9.67□□□□□ -0.86
RFC4-210ENST00000449502 GPR22Q99680 433 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 TMEM245Q9H330 911 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ASB8Q9H765 288 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 MLXIPLQ9NP71 852 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 PCDH12Q9NPG4 1184 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 PSD3Q9NYI0 1048 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 MID2Q9UJV3 735 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 GRID1Q9ULK0 1009 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 VWA7Q9Y334 891 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 PPIL1Q9Y3C6 166 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 STARD13Q9Y3M8 1113 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 GBF1Q92538 1859 aa9.67□□□□□ -0.86
RFC4-210ENST00000449502 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 MTCL1Q9Y4B5 1905 aaKnown RBP9.66□□□□□ -0.86
RFC4-210ENST00000449502 TSPAN11A1L157 253 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 F8W8V4 182 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 H7C0S8 307 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 TYROBPO43914 113 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 SRP72O76094 671 aaKnown RBP9.66□□□□□ -0.86
RFC4-210ENST00000449502 RHOBTB1O94844 696 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 PRAMEF1O95521 474 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 S1PR4O95977 384 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 CTSLP07711 333 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 GSTA1P08263 222 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 VIMP08670 466 aaKnown RBP9.66□□□□□ -0.86
RFC4-210ENST00000449502 F7P08709 466 aaPredicted RBP9.66□□□□□ -0.86
RFC4-210ENST00000449502 GLULP15104 373 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 PSMA3P25788 255 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 ITGB7P26010 798 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 LSP1P33241 339 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 NEK3P51956 506 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 STC1P52823 247 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 SEMG2Q02383 582 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 SFSWAPQ12872 951 aaKnown RBP9.66□□□□□ -0.86
RFC4-210ENST00000449502 ACOX1Q15067 660 aa9.66□□□□□ -0.86
RFC4-210ENST00000449502 PON2Q15165 354 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms