RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PCDH8O95206 1070 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ARNTP27540 789 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 LIG3P49916 1009 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 STC1P52823 247 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 TAS2R38P59533 333 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ACOX1Q15067 660 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 KBTBD12Q3ZCT8 623 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 HSP90AA5PQ58FG0 334 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 TMEM31Q5JXX7 168 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ALS2CLQ60I27 953 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 HSD11B1LQ7Z5J1 315 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 CTAGE3PQ8IX95 158 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 SPEM1Q8N4L4 309 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 OR14C36Q8NHC7 312 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 CXorf40AQ8TE69 158 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 PEX13Q92968 403 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ZIM3Q96PE6 472 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ACSS3Q9H6R3 686 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 PKD2L2Q9NZM6 624 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 CD84Q9UIB8 345 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 RABGEF1Q9UJ41 708 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 NCKAP1Q9Y2A7 1128 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 COQ6Q9Y2Z9 468 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 PLXNA2O75051 1894 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 DOCK9Q9BZ29 2069 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 CCDC162PA2VCL2 907 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 SMIM23A6NLE4 172 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 F7P08709 466 aaPredicted RBP14.61□□□□□ -0.07
TNF-208ENST00000449264 NUDT17P0C025 328 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 BPIP17213 487 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 HADHAP40939 763 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ETV3P41162 512 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 TPMTP51580 245 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ACVR1Q04771 509 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 THOC5Q13769 683 aaKnown RBP14.61□□□□□ -0.07
TNF-208ENST00000449264 PDPK2PQ6A1A2 396 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 FAM151BQ6UXP7 276 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 LIPIQ6XZB0 460 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 RFLNAQ6ZTI6 216 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 PTAR1Q7Z6K3 402 aaPredicted RBP14.61□□□□□ -0.07
TNF-208ENST00000449264 KBTBD6Q86V97 674 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 CDKN2AIPNLQ96HQ2 116 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 RUFY1Q96T51 708 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 CYTH2Q99418 400 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 FUT8Q9BYC5 575 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 TPSD1Q9BZJ3 242 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 SMYD2Q9NRG4 433 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 IARS2Q9NSE4 1012 aaKnown RBP14.61□□□□□ -0.07
TNF-208ENST00000449264 MOCS1Q9NZB8 636 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ZFATQ9P243 1243 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 RIMKLBQ9ULI2 386 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 FAM47DPA6NHR8 397 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 CXorf49A8MYA2 514 aaPredicted RBP14.6□□□□□ -0.07
TNF-208ENST00000449264 POC1B-GALNT4F8VUJ3 575 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 PI15O43692 258 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 MMP20O60882 483 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 GOT2P00505 430 aaKnown RBP14.6□□□□□ -0.07
TNF-208ENST00000449264 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 C6P13671 934 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 MC4RP32245 332 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 SPAM1P38567 509 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 ARCN1P48444 511 aaKnown RBP14.6□□□□□ -0.07
TNF-208ENST00000449264 ADPRHP54922 357 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 MGAT5Q09328 741 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 SFSWAPQ12872 951 aaKnown RBP14.6□□□□□ -0.07
TNF-208ENST00000449264 KLHL38Q2WGJ6 581 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 AFTPHQ6ULP2 937 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 USP30Q70CQ3 517 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 PPM1NQ8N819 430 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 CDKL2Q92772 493 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 FZD4Q9ULV1 537 aa14.6□□□□□ -0.07
TNF-208ENST00000449264 TMEM221A6NGB7 291 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 FAM159BA6NKW6 160 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 H0Y858 1186 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 M0R296 226 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 GPR39O43194 453 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 PLRG1O43660 514 aaKnown RBP14.59□□□□□ -0.07
TNF-208ENST00000449264 AP1G1O43747 822 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 LZTS3O60299 673 aaPredicted RBP14.59□□□□□ -0.07
TNF-208ENST00000449264 SASH3O75995 380 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 PRAMEF1O95521 474 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 APBB3O95704 486 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 SLCO1A2P46721 670 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 PXNP49023 591 aaPredicted RBP14.59□□□□□ -0.07
TNF-208ENST00000449264 SPINT3P49223 89 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 FRG1Q14331 258 aaKnown RBP14.59□□□□□ -0.07
TNF-208ENST00000449264 STAT4Q14765 748 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 TMEM52BQ4KMG9 183 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 ZNF470Q6ECI4 717 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 Q6ZVL8 140 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 GPR26Q8NDV2 337 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 EPS8L3Q8TE67 593 aaKnown RBP14.59□□□□□ -0.07
TNF-208ENST00000449264 AGAP2Q99490 1192 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 CCDC77Q9BR77 488 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 CYP8B1Q9UNU6 501 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 CACNA1IQ9P0X4 2223 aa14.59□□□□□ -0.07
TNF-208ENST00000449264 GLYATL1P3A0A0U1RQE8 302 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 PSMD11O00231 422 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 SLC7A4O43246 635 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 TSPAN6O43657 245 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms