RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
RTFDC1-204ENST00000449062 CEP41Q9BYV8 373 aa14.06□□□□□ -0.16
RTFDC1-204ENST00000449062 SLC13A1Q9BZW2 595 aa14.06□□□□□ -0.16
RTFDC1-204ENST00000449062 EFR3BQ9Y2G0 817 aa14.06□□□□□ -0.16
RTFDC1-204ENST00000449062 CFAP47Q6ZTR5 3102 aa14.06□□□□□ -0.16
RTFDC1-204ENST00000449062 GRID2IPA4D2P6 1211 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 EME2A4GXA9 379 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 TRABD2BA6NFA1 517 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 CAPN8A6NHC0 703 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 PPP1R12AO14974 1030 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 OPA1O60313 960 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 CLDN7O95471 211 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 GP1BAP07359 652 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 ZNF30P17039 623 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 NFKBIAP25963 317 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 PTPN3P26045 913 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 CTNNA2P26232 953 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 COPS2P61201 443 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 SLC14A2Q15849 920 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 KAZNQ674X7 775 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 OGFOD3Q6PK18 319 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 BZW1Q7L1Q6 419 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 ZNF765Q7L2R6 523 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 NT5DC3Q86UY8 548 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 SLC35F3Q8IY50 421 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 NDUFAF2Q8N183 169 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 DCBLD1Q8N8Z6 715 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 OR56A4Q8NGH8 313 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 KIAA1524Q8TCG1 905 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 PTCD2Q8WV60 388 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 ALG3Q92685 438 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 PDXPQ96GD0 296 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 SCARF2Q96GP6 870 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 AGAP3Q96P47 875 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 WDR26Q9H7D7 661 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 GLOD4Q9HC38 313 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 MRPL40Q9NQ50 206 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 DKK4Q9UBT3 224 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 KLQ9UEF7 1012 aa14.05□□□□□ -0.16
RTFDC1-204ENST00000449062 ITPR1Q14643 2758 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 CACNB4O00305 520 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 TNFP01375 233 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 MYCLP1P12525 358 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 JUPP14923 745 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 PTPN7P35236 360 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 DUSP3P51452 185 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 DAB2P98082 770 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 TARDBPQ13148 414 aaKnown RBP eCLIP14.04□□□□□ -0.164e-6■■■■□ 19.5
RTFDC1-204ENST00000449062 ARHGEF7Q14155 803 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 ELOCQ15369 112 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 C6orf132Q5T0Z8 1188 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 HES3Q5TGS1 186 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 DENND2CQ68D51 928 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 ADAMTSL4Q6UY14 1074 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 RD3Q7Z3Z2 195 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 SPC24Q8NBT2 197 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 LPCAT1Q8NF37 534 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 ATL2Q8NHH9 583 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 SPATA22Q8NHS9 363 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 TFB1MQ8WVM0 346 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 RBM41Q96IZ5 413 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 AGAP2Q99490 1192 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 HEMGNQ9BXL5 484 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 FRMD8Q9BZ67 464 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 HAUS2Q9NVX0 235 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 TRIM10Q9UDY6 481 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 ZMIZ1Q9ULJ6 1067 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 CNOT6Q9ULM6 557 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 TTLL3Q9Y4R7 772 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 ST14Q9Y5Y6 855 aa14.04□□□□□ -0.16
RTFDC1-204ENST00000449062 FAM208BQ5VWN6 2430 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 APOC4-APOC2K7ER74 178 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 APOC2P02655 101 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 ANXA6P08133 673 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 PYGMP11217 842 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 CA4P22748 312 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 KELP23276 732 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 EPHB1P54762 984 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 CDK3Q00526 305 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 CDK18Q07002 472 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 XRCC4Q13426 336 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 HS1BP3Q53T59 392 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 ODF2Q5BJF6 829 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 GUSBP11Q6P575 273 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 HEATR4Q86WZ0 1026 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 NRROSQ86YC3 692 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 NRSN1Q8IZ57 195 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 P3H4Q92791 437 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 COX14Q96I36 57 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 DESI2Q9BSY9 194 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 ANP32EQ9BTT0 268 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 TMEM168Q9H0V1 697 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 NCKIPSDQ9NZQ3 722 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 SEPT10Q9P0V9 454 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 CD84Q9UIB8 345 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms