RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GPBAR1Q8TDU6 330 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 TEKT4Q8WW24 435 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 SMIM14Q96QK8 99 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 CCNL2Q96S94 520 aaPredicted RBP28.26■■■□□ 2.11
CBX4-202ENST00000448310 FRMD8Q9BZ67 464 aaPredicted RBP28.26■■■□□ 2.11
CBX4-202ENST00000448310 NT5MQ9NPB1 228 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 ANAPC7Q9UJX3 599 aa28.26■■■□□ 2.11
CBX4-202ENST00000448310 NUDT21O43809 227 aaKnown RBP28.25■■■□□ 2.11
CBX4-202ENST00000448310 AK4P27144 223 aaPredicted RBP28.25■■■□□ 2.11
CBX4-202ENST00000448310 SERPINB6P35237 376 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 POLD2P49005 469 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 CDH6P55285 790 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 MMRN1Q13201 1228 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 SRSF6Q13247 344 aaKnown RBP28.25■■■□□ 2.11
CBX4-202ENST00000448310 KRT81Q14533 505 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 FIGNQ5HY92 759 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 ARMC12Q5T9G4 340 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 RFLNAQ6ZTI6 216 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 KIAA1524Q8TCG1 905 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 ZDHHC1Q8WTX9 485 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 NUP85Q9BW27 656 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 SUFUQ9UMX1 484 aa28.25■■■□□ 2.11
CBX4-202ENST00000448310 ZFC3H1O60293 1989 aaKnown RBP28.24■■■□□ 2.11
CBX4-202ENST00000448310 EFSO43281 561 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 FGF1P05230 155 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 CD48P09326 243 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 ETV5P41161 510 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 B4GALNT1Q00973 533 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 PHF19Q5T6S3 580 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 NIPA2Q8N8Q9 360 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 SCRN2Q96FV2 425 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 MCCC1Q96RQ3 725 aaPredicted RBP28.24■■■□□ 2.11
CBX4-202ENST00000448310 FUCA2Q9BTY2 467 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 GSDMCQ9BYG8 508 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 SEMA6CQ9H3T2 930 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 RDH14Q9HBH5 336 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 TAAR2Q9P1P5 351 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 IP6K2Q9UHH9 426 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 CD84Q9UIB8 345 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 ST14Q9Y5Y6 855 aa28.24■■■□□ 2.11
CBX4-202ENST00000448310 B4GAT1O43505 415 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 PDHA1P08559 390 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 NFKBIAP25963 317 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 SSR1P43307 286 aaKnown RBP28.23■■■□□ 2.11
CBX4-202ENST00000448310 OR1D5P58170 312 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 ILF3Q12906 894 aaKnown RBP eCLIP28.23■■■□□ 2.11
CBX4-202ENST00000448310 AMZ1Q400G9 498 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 MAP9Q49MG5 647 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 DOK6Q6PKX4 331 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 SLC30A9Q6PML9 568 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 SLITRK4Q8IW52 837 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.23■■■□□ 2.11
CBX4-202ENST00000448310 PIH1D2Q8WWB5 315 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 PATE1Q8WXA2 126 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 SEMA3CQ99985 751 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 KCTD5Q9NXV2 234 aa28.23■■■□□ 2.11
CBX4-202ENST00000448310 PRAMEF33A0A0G2JMD5 474 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 PSMD11O00231 422 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 MFSD11O43934 449 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 PRAMEF10O60809 474 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 IL4RP24394 825 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 MAPK10P53779 464 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 ITKQ08881 620 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 RALGPS1Q5JS13 557 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 USP45Q70EL2 814 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 CPNE8Q86YQ8 564 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 CPLX3Q8WVH0 158 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 TRNAU1APQ9NX07 287 aaKnown RBP28.22■■■□□ 2.11
CBX4-202ENST00000448310 ACSL6Q9UKU0 697 aa28.22■■■□□ 2.11
CBX4-202ENST00000448310 A0A087X0T9 212 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 NVLO15381 856 aaKnown RBP28.21■■■□□ 2.11
CBX4-202ENST00000448310 MAP3K6O95382 1288 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 ECEL1O95672 775 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 FAM228BP0C875 321 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 KRT10P13645 584 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 ALDH4A1P30038 563 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 GJC1P36383 396 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 FANCCQ00597 558 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 TECPR1Q7Z6L1 1165 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 C17orf82Q86X59 251 aaPredicted RBP28.21■■■□□ 2.11
CBX4-202ENST00000448310 TEX26Q8N6G2 289 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 FOXJ2Q9P0K8 574 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 SLC17A4Q9Y2C5 497 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 PLEKHM1Q9Y4G2 1056 aa28.21■■■□□ 2.11
CBX4-202ENST00000448310 BZW2Q9Y6E2 419 aaKnown RBP28.21■■■□□ 2.11
CBX4-202ENST00000448310 A0A1W2PQJ5 194 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 RHPN2P1A8MT19 583 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 CYP1A2P05177 515 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 PBX1P40424 430 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 GPR1P46091 355 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 CTBSQ01459 385 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 C16orf72Q14CZ0 275 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 NFKBIBQ15653 356 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 ATP13A4Q4VNC1 1196 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 LRRC66Q68CR7 880 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 USP53Q70EK8 1073 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 ZFAND4Q86XD8 727 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 USP7Q93009 1102 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 CMKLR1Q99788 373 aa28.2■■■□□ 2.1
CBX4-202ENST00000448310 NUDT22Q9BRQ3 303 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms