RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 NEPROQ6NW34 567 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 GPRIN1Q7Z2K8 1008 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 BEST2Q8NFU1 509 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 NSUN5Q96P11 429 aaKnown RBP20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 SLC30A3Q99726 388 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 SLX1AQ9BQ83 275 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 CD320Q9NPF0 282 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 PCDH12Q9NPG4 1184 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 NDUFAF1Q9Y375 327 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 DOCK1Q14185 1865 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 XYLBO75191 536 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 GSK3BP49841 420 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 UNC50Q53HI1 259 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 AGAP9Q5VTM2 703 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 PAQR9Q6ZVX9 377 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 TRPM4Q8TD43 1214 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 SNX27Q96L92 541 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 MED10Q9BTT4 135 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 DUSP16Q9BY84 665 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 ERAP1Q9NZ08 941 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 CACNG4Q9UBN1 327 aa20.47■□□□□ 0.87
SMARCD2-203ENST00000448276 A0A1B0GTL3 188 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 DIO3P55073 304 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 ADARB1P78563 741 aaKnown RBP20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 ECT2LQ008S8 904 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 POU4F1Q01851 419 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 RIOX2Q8IUF8 465 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 B3GALNT2Q8NCR0 500 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 OR52K2Q8NGK3 314 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 ZC3H15Q8WU90 426 aaKnown RBP20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 TEX37Q96LM6 180 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 FBXW11Q9UKB1 542 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 USP17L7P0C7H9 530 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 MBL2P11226 248 aaPredicted RBP20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 PCNAP12004 261 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 HSD17B1P14061 328 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 GRSF1Q12849 480 aaKnown RBP eCLIP20.46■□□□□ 0.875e-12■■■□□ 16.3
SMARCD2-203ENST00000448276 AQP6Q13520 282 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 ZBTB6Q15916 424 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 ZNF678Q5SXM1 525 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 ZNF773Q6PK81 442 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 USP51Q70EK9 711 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 LINC00523Q86TU6 105 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 HOPXQ9BPY8 73 aaPredicted RBP20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 C1orf50Q9BV19 199 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 DGCR6LQ9BY27 220 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 TKTL2Q9H0I9 626 aa20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 TSPYL2Q9H2G4 693 aaPredicted RBP20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 WARS2Q9UGM6 360 aaKnown RBP20.46■□□□□ 0.87
SMARCD2-203ENST00000448276 TCRBV5S2A0A599 114 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 NCAM2O15394 837 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 CPNE6O95741 557 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 SLC4A1P02730 911 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 JAK1P23458 1154 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 RAD23AP54725 363 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 RAB15P59190 212 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 IMPG1Q17R60 797 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 IRAK1BP1Q5VVH5 260 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 CLEC20AQ6ZU45 233 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 MIER2Q8N344 545 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 PDZD8Q8NEN9 1154 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 APPL2Q8NEU8 664 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 ABHD11Q8NFV4 315 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 RNF145Q96MT1 663 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 SLC2A13Q96QE2 648 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 SIK2Q9H0K1 926 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 FAM124BQ9H5Z6 455 aaPredicted RBP20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 TSC22D4Q9Y3Q8 395 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 FAM32AQ9Y421 112 aaKnown RBP20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 SLC30A1Q9Y6M5 507 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 ESRRBO95718 433 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 TCF3P15923 654 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 HOXA11P31270 313 aaPredicted RBP20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 CDKN2DP55273 166 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 LIPEQ05469 1076 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 MTA1Q13330 715 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 MINDY1Q8N5J2 469 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 TERB1Q8NA31 727 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 ING2Q9H160 280 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 ALG2Q9H553 416 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 MID1IP1Q9NPA3 183 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 PSME2Q9UL46 239 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 PCDHA9Q9Y5H5 950 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 MCM3APO60318 1980 aa20.45■□□□□ 0.86
SMARCD2-203ENST00000448276 MYLKQ15746 1914 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 FZD9O00144 591 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 MAN1A2O60476 641 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 SEC14L2O76054 403 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 RECQL4O94761 1208 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 NPR3P17342 541 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 IMPDH1P20839 514 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 CXCR3P49682 368 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 KPNA2P52292 529 aaKnown RBP20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 PLA2G16P53816 162 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 TMBIM6P55061 237 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 SOX4Q06945 474 aaPredicted RBP20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 RPS6KA2Q15349 733 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 CCDC92Q53HC0 331 aaPredicted RBP20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 PAGE3Q5JUK9 113 aa20.44■□□□□ 0.86
SMARCD2-203ENST00000448276 IFNLR1Q8IU57 520 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms