RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 SLC2A6Q9UGQ3 507 aa11.91□□□□□ -0.5
SCAP-208ENST00000448217 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
SCAP-208ENST00000448217 PKP3Q9Y446 797 aa11.91□□□□□ -0.5
SCAP-208ENST00000448217 TRPM6Q9BX84 2022 aa11.91□□□□□ -0.5
SCAP-208ENST00000448217 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 TCRBV21S2A2A0A5A6 115 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 AGAP14A8MT82 685 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 PLRG1O43660 514 aaKnown RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 C1SP09871 688 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 SPINT3P49223 89 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 ARSDP51689 593 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 XIAPP98170 497 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 ILF2Q12905 390 aaKnown RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 CWF19L1Q69YN2 538 aaKnown RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 KIAA0408Q6ZU52 694 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 MARK2Q7KZI7 788 aaKnown RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 ZNF765Q7L2R6 523 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 KCNMB4Q86W47 210 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 SLC26A11Q86WA9 606 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 NRSN1Q8IZ57 195 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 CAMKK1Q8N5S9 505 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 GABPB2Q8TAK5 448 aaPredicted RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 CALML6Q8TD86 181 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 ASB12Q8WXK4 309 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 CDKL2Q92772 493 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 HDAC10Q969S8 669 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 TTC28Q96AY4 2481 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 TBATAQ96M53 351 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 COQ10AQ96MF6 247 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 FAM167BQ9BTA0 163 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 FBXL12Q9NXK8 326 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 NSMCE4AQ9NXX6 385 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 PKD2L2Q9NZM6 624 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
SCAP-208ENST00000448217 SLC24A2Q9UI40 661 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 APPL1Q9UKG1 709 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 PLAAQ9Y263 795 aa11.9□□□□□ -0.5
SCAP-208ENST00000448217 A0A1W2PP55 124 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 GAPDHSO14556 408 aaPredicted RBP11.89□□□□□ -0.51
SCAP-208ENST00000448217 SASH3O75995 380 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 VAPBO95292 243 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 SHBGP04278 402 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 IVLP07476 585 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 BPIP17213 487 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 GM2AP17900 193 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
SCAP-208ENST00000448217 HOXA6P31267 233 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 PEX6Q13608 980 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 POM121L1PQ3SYA9 428 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 KBTBD12Q3ZCT8 623 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 TEDDM1Q5T9Z0 273 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 AFTPHQ6ULP2 937 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.89□□□□□ -0.51
SCAP-208ENST00000448217 LRRC6Q86X45 466 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 TSTD1Q8NFU3 115 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 OR4L1Q8NH43 312 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 ZIM3Q96PE6 472 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 TCF12Q99081 682 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 OMDQ99983 421 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 MCMBPQ9BTE3 642 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 PREBQ9HCU5 417 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 IL26Q9NPH9 171 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 SMYD2Q9NRG4 433 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 C20orf96Q9NUD7 363 aaPredicted RBP11.89□□□□□ -0.51
SCAP-208ENST00000448217 EURLQ9NYK6 297 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 SERGEFQ9UGK8 458 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 EBF1Q9UH73 591 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 NCKAP1Q9Y2A7 1128 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 NUMA1Q14980 2115 aa11.89□□□□□ -0.51
SCAP-208ENST00000448217 TRBV5-4A0A0C4DH59 114 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 EXOC1LA0A1B0GW35 172 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 CCDC162PA2VCL2 907 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 PLK4O00444 970 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 BUD23O43709 281 aaKnown RBP11.88□□□□□ -0.51
SCAP-208ENST00000448217 RNASEH2AO75792 299 aaKnown RBP11.88□□□□□ -0.51
SCAP-208ENST00000448217 APBB3O95704 486 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 GOT2P00505 430 aaKnown RBP11.88□□□□□ -0.51
SCAP-208ENST00000448217 ELFN1P0C7U0 828 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 ERVK-10P10266 1014 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 ACADMP11310 421 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 AOC1P19801 751 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 GCAP28676 217 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 FOXN2P32314 431 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 SPAM1P38567 509 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 LIG3P49916 1009 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 TPMTP51580 245 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 CLCN5P51795 746 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 PRAMEP78395 509 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 DPTQ07507 201 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 ZNF844Q08AG5 666 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 MTAPQ13126 283 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 PTPRCAPQ14761 206 aa11.88□□□□□ -0.51
SCAP-208ENST00000448217 TYSND1Q2T9J0 566 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms