RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 FLRT2O43155 660 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 USP12O75317 370 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 ANXA9O76027 345 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 KCNK5O95279 499 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 IFNB1P01574 187 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 MSNP26038 577 aaKnown RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 YPEL5P62699 121 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 PTSQ03393 145 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 SLC14A1Q13336 389 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 PTK2BQ14289 1009 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 SPARCL1Q14515 664 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 NFATC4Q14934 902 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 SIX1Q15475 284 aaPredicted RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 OASLQ15646 514 aaKnown RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 ALS2CLQ60I27 953 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 PNCKQ6P2M8 343 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 ENPP7Q6UWV6 458 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 MACC1Q6ZN28 852 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 PIP4P1Q86T03 277 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 HEATR4Q86WZ0 1026 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 DCP2Q8IU60 420 aaKnown RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 BLOC1S5Q8TDH9 187 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 RHBDD1Q8TEB9 315 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 SCAMP4Q969E2 229 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 FUBP1Q96AE4 644 aaKnown RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 LYSMD1Q96S90 227 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 GPR63Q9BZJ6 419 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 ABCG8Q9H221 673 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 TCEAL2Q9H3H9 227 aaPredicted RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 SLC32A1Q9H598 525 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 WDR26Q9H7D7 661 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 SUDS3Q9H7L9 328 aaPredicted RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 UCKL1Q9NWZ5 548 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 PKD2L2Q9NZM6 624 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 KLF15Q9UIH9 416 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 MOSPD1Q9UJG1 213 aa11.9□□□□□ -0.5
RFC4-208ENST00000447345 PNMA8BQ9ULN7 279 aaPredicted RBP11.9□□□□□ -0.5
RFC4-208ENST00000447345 LOC285095A0A1B0GVY8 99 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 C5orf60A6NFR6 353 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 H3BM21 787 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 CACNB4O00305 520 aaPredicted RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 AURKAO14965 403 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 YKT6O15498 198 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 PCDHGA12O60330 932 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 PIAS2O75928 621 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 METTL18O95568 372 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 AGTP01019 485 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 ETS1P14921 441 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 NME1P15531 152 aaKnown RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 TSHRP16473 764 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 JUNDP17535 347 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 CSRP1P21291 193 aaKnown RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 HTR1BP28222 390 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 GRK6P43250 576 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 GPR1P46091 355 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 RXRGP48443 463 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 GNG11P61952 73 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 SUZ12Q15022 739 aaKnown RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 SLC1A5Q15758 541 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 CDKN3Q16667 212 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 ALG11Q2TAA5 492 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 INAVAQ3KP66 663 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 KCTD16Q68DU8 428 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 DOK6Q6PKX4 331 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 TRIM74Q86UV6 250 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 HID1Q8IV36 788 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 EID2Q8N6I1 236 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 ZNF548Q8NEK5 533 aaPredicted RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 CCHCR1Q8TD31 782 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 SAP25Q8TEE9 199 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 TSACCQ96A04 125 aaPredicted RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 WDR92Q96MX6 357 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 OSBPL9Q96SU4 736 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 AGAP2Q99490 1192 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 RIOK2Q9BVS4 552 aaKnown RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 LGR4Q9BXB1 951 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 FRMD8P1Q9BZ68 369 aaPredicted RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 ZFYVE1Q9HBF4 777 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 KLQ9UEF7 1012 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 PCOLCE2Q9UKZ9 415 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
RFC4-208ENST00000447345 PCDHGB2Q9Y5G2 931 aa11.89□□□□□ -0.51
RFC4-208ENST00000447345 ARHGEF17Q96PE2 2063 aaPredicted RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 TMEM202A6NGA9 273 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 INPP4BO15327 924 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 BUD23O43709 281 aaKnown RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 GCATO75600 419 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 SOD1P00441 154 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 CSF2P04141 144 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 FGF1P05230 155 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 MYCLP1P12525 358 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms