RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 BCAT1P54687 386 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 TBRG1Q3YBR2 411 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 BRSK2Q8IWQ3 736 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 CCM2LQ9NUG4 571 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 PRG3Q9Y2Y8 225 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 DEPDC5O75140 1603 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 MYCP01106 439 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 ICAM1P05362 532 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 CDKL1Q00532 357 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 CD83Q01151 205 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 GLIS1Q8NBF1 620 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 SLC9A8Q9Y2E8 581 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 MLYCDO95822 493 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 CHRNB1P11230 501 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 YBX3P16989 372 aaKnown RBP eCLIP7.87□□□□□ -1.152e-6■■■□□ 17.4
SMG1-202ENST00000446231 FMO4P31512 558 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PIGGQ5H8A4 983 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMG1-202ENST00000446231 FAM9CQ8IZT9 166 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 EFHBQ8N7U6 833 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 DHRS4Q9BTZ2 278 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 POPDC2Q9HBU9 364 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 NOD1Q9Y239 953 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 TNPO3Q9Y5L0 923 aaKnown RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 CDC42BPBQ9Y5S2 1711 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ICMTO60725 284 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ANGPTL1O95841 491 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 MLNP12872 115 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 SLC17A6Q9P2U8 582 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 GLI2P10070 1586 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PDPK1O15530 556 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 RSL1D1O76021 490 aaKnown RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 STAG3L4Q8TBR4 150 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PDGFCQ9NRA1 345 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 M0QYT0 321 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 TSPAN1O60635 241 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 EFCAB14O75071 495 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 GMFBP60983 142 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 FIBCD1Q8N539 461 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 POLR3BQ9NW08 1133 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 A0A0J9YYE9 177 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ATE1O95260 518 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 HPCAL1P37235 193 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 EFR3AQ14156 821 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 SEZ6Q53EL9 994 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ANKRD26P1Q6NSI1 321 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 SCML4Q8N228 414 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 FAM84AQ96KN4 292 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PAK1IP1Q9NWT1 392 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 OXSMQ9NWU1 459 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 GMIPQ9P107 970 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PFDN2Q9UHV9 154 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 LHX5Q9H2C1 402 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 BTRCQ9Y297 605 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 ABCB7O75027 752 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 CPSF4O95639 269 aaKnown RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 RPLP0P05388 317 aaKnown RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 ZRANB3Q5FWF4 1079 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PPP3R2Q96LZ3 170 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ZNHIT2Q9UHR6 403 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ERBB2P04626 1255 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 NCAM1P13591 858 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 OPRL1P41146 370 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 UGT3A1Q6NUS8 523 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 FAM183BPQ6ZVS7 135 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 MRPS7Q9Y2R9 242 aaKnown RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 DLC1Q96QB1 1528 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 MEIS2O14770 477 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PLD2O14939 933 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 F9P00740 461 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 HLCSP50747 726 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ALDH3A2P51648 485 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 AKIRIN2Q53H80 203 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 SPATA19Q7Z5L4 167 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 BIRC7Q96CA5 298 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 NECTIN3Q9NQS3 549 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 RASSF1Q9NS23 344 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 PEPDP12955 493 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 SCRN3Q0VDG4 424 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 DPY19L3Q6ZPD9 716 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 C4orf19Q8IY42 314 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 HEXDCQ8WVB3 486 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 STARP49675 285 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 RHDQ02161 417 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ZNF404Q494X3 552 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 INO80DQ53TQ3 878 aaPredicted RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 ZNF549Q6P9A3 640 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 ZC3H3Q8IXZ2 948 aaKnown RBP7.87□□□□□ -1.15
SMG1-202ENST00000446231 OR5K1Q8NHB7 308 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 MYH3P11055 1940 aa7.87□□□□□ -1.15
SMG1-202ENST00000446231 BCLAF3A2AJT9 711 aaKnown RBP7.86□□□□□ -1.15
SMG1-202ENST00000446231 DNAJB5O75953 348 aa7.86□□□□□ -1.15
SMG1-202ENST00000446231 SMIM11AP58511 58 aa7.86□□□□□ -1.15
SMG1-202ENST00000446231 WDR6Q9NNW5 1121 aaKnown RBP7.86□□□□□ -1.15
SMG1-202ENST00000446231 TMEM150BA6NC51 233 aa7.86□□□□□ -1.15
SMG1-202ENST00000446231 KDM4BO94953 1096 aa7.86□□□□□ -1.15
SMG1-202ENST00000446231 MOCS2O96007 188 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms