RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CDC14AQ9UNH5 594 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 ADAMTS12P58397 1594 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 EHBP1L1Q8N3D4 1523 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 CCDC18Q5T9S5 1454 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 TRIP12Q14669 1992 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 FRMD3A2A2Y4 597 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 SMAD6O43541 496 aaKnown RBP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZBED4O75132 1171 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 NDUFS7O75251 213 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 OR2C1O95371 312 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 CH25HO95992 272 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 KRT10P13645 584 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZNF182P17025 639 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 CD58P19256 250 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 C21orf33P30042 268 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 UBA7P41226 1012 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 THBS3P49746 956 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 CDONQ4KMG0 1287 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 PAPPA-AS1Q5QFB9 102 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 MZT2BQ6NZ67 158 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 PQLC2Q6ZP29 291 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 FBXL14Q8N1E6 418 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 WDTC1Q8N5D0 677 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 IQCF1Q8N6M8 205 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 OR14L1PQ8NHC6 308 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 RND1Q92730 232 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 PHF21BQ96EK2 531 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 WACQ9BTA9 647 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 NDST4Q9H3R1 872 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 RANGRFQ9HD47 186 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 MAP3K20Q9NYL2 800 aaKnown RBP4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 TINAGQ9UJW2 476 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 ERVK-11Q9UQG0 969 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 PAM16Q9Y3D7 125 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 HECW1Q76N89 1606 aa4.57□□□□□ -1.68
HMGB3P6-201ENST00000444896 SNAPC4Q5SXM2 1469 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 IFT140Q96RY7 1462 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 SETD5Q9C0A6 1442 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 MTUS2Q5JR59 1369 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 SUPT6HQ7KZ85 1726 aaKnown RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 A0A0U1RQJ8 604 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 LINC01553A4QN01 128 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 SERPINI2O75830 405 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 SSTR2P30874 369 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 HADHAP40939 763 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 CDKN2AP42771 156 aaKnown RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 PDLIM4P50479 330 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 KRTAP10-11P60412 298 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 NFATC4Q14934 902 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 SOWAHCQ53LP3 525 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 PPP6R3Q5H9R7 873 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 METTL2BQ6P1Q9 378 aaKnown RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 KLHL35Q6PF15 583 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 FJX1Q86VR8 437 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 SAMD14Q8IZD0 417 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 PGBD5Q8N414 524 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 NEUROG1Q92886 237 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 ARHGEF26Q96DR7 871 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 METTL2AQ96IZ6 378 aaKnown RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 GHITMQ9H3K2 345 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 PPP1R3EQ9H7J1 279 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 EIF2B3Q9NR50 452 aaKnown RBP4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 LYVE1Q9Y5Y7 322 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 IQGAP2Q13576 1575 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 WDR62O43379 1518 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 ARHGEF40Q8TER5 1519 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 TAF1P21675 1872 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 GRIN2BQ13224 1484 aa4.56□□□□□ -1.68
HMGB3P6-201ENST00000444896 RAB3GAP2Q9H2M9 1393 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 hDV102S1A0JD36 115 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 FSD2A1L4K1 749 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 PRSS47A8MTI9 375 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 A8MZ25 164 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 BTBD18B2RXH4 712 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 VCYO14598 125 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 KCNJ13O60928 360 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 TIPRLO75663 272 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 IPO7O95373 1038 aaKnown RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ACAA1P09110 424 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 T-ENOLP0DO92 83 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 TKTP29401 623 aaKnown RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 RAD23BP54727 409 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ARF3P61204 181 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ARF1P84077 181 aaKnown RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 LTBQ06643 244 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 GOLGA8DPQ0D2H9 430 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 DHX34Q14147 1143 aaKnown RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 PLCB4Q15147 1175 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 SETMARQ53H47 684 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 TMED8Q6PL24 325 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 GLDNQ6ZMI3 551 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 TAOK1Q7L7X3 1001 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZDHHC17Q8IUH5 632 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms