RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 IFNB1P01574 187 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 CSRP1P21291 193 aaKnown RBP10.82□□□□□ -0.68
HDAC6-211ENST00000443563 TRIM23P36406 574 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 FDFT1P37268 417 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 GRK6P43250 576 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 BLKP51451 505 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 SNX1Q13596 522 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 NFATC4Q14934 902 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 SIX1Q15475 284 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-211ENST00000443563 SIRPB2Q5JXA9 342 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 ZDHHC20Q5W0Z9 365 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 DBX2Q6ZNG2 339 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 Q6ZVL8 140 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 GSTA5Q7RTV2 222 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 KLHDC8BQ8IXV7 354 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 ACTRT1Q8TDG2 376 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 AP2M1Q96CW1 435 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 NAPGQ99747 312 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-211ENST00000443563 FICDQ9BVA6 458 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 WDR26Q9H7D7 661 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 LRRC40Q9H9A6 602 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 IL21RQ9HBE5 538 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 PHPT1Q9NRX4 125 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-211ENST00000443563 DNAJC28Q9NX36 388 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC6-211ENST00000443563 PAK5Q9P286 719 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 ZNF711Q9Y462 761 aa10.82□□□□□ -0.68
HDAC6-211ENST00000443563 SPTBN4Q9H254 2564 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 CTAGE9A4FU28 777 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 NEMP2A6NFY4 417 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 E7EVH7 732 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 TM4SF5O14894 197 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 PPFIA2O75334 1257 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 CSF2P04141 144 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 C1SP09871 688 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 ATXN1LP0C7T5 689 aaKnown RBP10.81□□□□□ -0.68
HDAC6-211ENST00000443563 ALPPL2P10696 532 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 CEACAM1P13688 526 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 CD59P13987 128 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 GM2AP17900 193 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 EPHA8P29322 1005 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-211ENST00000443563 GPR1P46091 355 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 SPINT3P49223 89 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 GDF10P55107 478 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 KIAA1024LP59773 190 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 PDE1BQ01064 536 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 FZD2Q14332 565 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 PTPRRQ15256 657 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 CDKN3Q16667 212 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 HS1BP3Q53T59 392 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 FAM182AQ5T1J6 154 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 RAET1GQ6H3X3 334 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 RANBP10Q6VN20 620 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 LYSMD3Q7Z3D4 306 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 GLT6D1Q7Z4J2 308 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 TMC3Q7Z5M5 1100 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 PIP4P1Q86T03 277 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 LINC00523Q86TU6 105 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 NAXDQ8IW45 347 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 SLC25A41Q8N5S1 370 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 PLA2G15Q8NCC3 412 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 SETD7Q8WTS6 366 aaKnown RBP10.81□□□□□ -0.68
HDAC6-211ENST00000443563 TBATAQ96M53 351 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 WDR92Q96MX6 357 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 TBL1YQ9BQ87 522 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 SLC13A1Q9BZW2 595 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 ABCG8Q9H221 673 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 FAM83DQ9H4H8 585 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 NFKBIL1Q9UBC1 381 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-211ENST00000443563 SHOC2Q9UQ13 582 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 SCN8AQ9UQD0 1980 aa10.81□□□□□ -0.68
HDAC6-211ENST00000443563 COL5A1P20908 1838 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 C2orf81A6NN90 581 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 TNFRSF10CO14798 259 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 RASGRP1O95267 797 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 METTL18O95568 372 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 AP2A1O95782 977 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 GAS8O95995 478 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 AGTP01019 485 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 TNFP01375 233 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PIRTP0C851 137 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 MYCLP1P12525 358 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 NME1P15531 152 aaKnown RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 JUNDP17535 347 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 ADRA1AP35348 466 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 HMGCLP35914 325 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 LMAN1P49257 510 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 DCDC1P59894 354 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 IL9RQ01113 521 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PPARDQ03181 441 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PRAMEF14Q5SWL7 426 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 FAXCQ5TGI0 409 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PAPD7Q5XG87 772 aaKnown RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PDPK2PQ6A1A2 396 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 ENPP7Q6UWV6 458 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 ADAMTSL4Q6UY14 1074 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 SDR16C5Q8N3Y7 309 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PRELID2Q8N945 189 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 OR56A4Q8NGH8 313 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms