RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UNGP13051 313 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-208ENST00000443046 ADCY8P40145 1251 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 GNPDA1P46926 289 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 FASLGP48023 281 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 AIF1P55008 147 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 CDK3Q00526 305 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 CDR2Q01850 454 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 BCL2L1Q07817 233 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 PEX6Q13608 980 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 ACOX1Q15067 660 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 DEFB109BQ30KR1 87 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 HIST2H2BCQ6DN03 193 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 FAM129CQ86XR2 697 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 UNC5BQ8IZJ1 945 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 KIAA1143Q96AT1 154 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-208ENST00000443046 NUS1Q96E22 293 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 C11orf70Q9BRQ4 267 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 KCTD5Q9NXV2 234 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 KCNK4Q9NYG8 393 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 KIAA1468Q9P260 1216 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 B4GALT6Q9UBX8 382 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 KCNMB2Q9Y691 235 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 TCRBV5S1A1TA0A578 114 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 A8MX80 341 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 K7EM74 188 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 DLGAP3O95886 979 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 PRKCSHP14314 528 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-208ENST00000443046 GPD1P21695 349 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 ERCC5P28715 1186 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-208ENST00000443046 HTR7P34969 479 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 POLD2P49005 469 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 PAPOLAP51003 745 aaKnown RBP14.36□□□□□ -0.11
HMGN1-208ENST00000443046 MC1RQ01726 317 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 CNGA3Q16281 694 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 ATP1A1-AS1Q5TC04 95 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 TCTN3Q6NUS6 607 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 WDR74Q6RFH5 385 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-208ENST00000443046 CEACAM20Q6UY09 585 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 ATCAYQ86WG3 371 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 NRSN1Q8IZ57 195 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 STARD8Q92502 1023 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 TUBGCP2Q9BSJ2 902 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 SLC39A8Q9C0K1 460 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 TRIT1Q9H3H1 467 aaKnown RBP14.36□□□□□ -0.11
HMGN1-208ENST00000443046 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-208ENST00000443046 TP53TG5Q9Y2B4 290 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 KCTD3Q9Y597 815 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 CACNA1DQ01668 2161 aa14.36□□□□□ -0.11
HMGN1-208ENST00000443046 SIGLEC16A6NMB1 481 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 CCP110O43303 1012 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 HTRA2O43464 458 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-208ENST00000443046 PALMO75781 387 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 HEXIM1O94992 359 aaKnown RBP14.35□□□□□ -0.11
HMGN1-208ENST00000443046 STAT5AP42229 794 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 ZNF143P52747 638 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-208ENST00000443046 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-208ENST00000443046 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 DTD2Q96FN9 168 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 CELF6Q96J87 481 aaKnown RBP14.35□□□□□ -0.11
HMGN1-208ENST00000443046 PCDHB18PQ96TA0 734 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 CTRCQ99895 268 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 SUDS3Q9H7L9 328 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-208ENST00000443046 DONSONQ9NYP3 566 aa14.35□□□□□ -0.11
HMGN1-208ENST00000443046 ARHGAP42A6NI28 874 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 GADD45BO75293 160 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-208ENST00000443046 STK17BO94768 372 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 SOD1P00441 154 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 TCN2P20062 427 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 NR1D1P20393 614 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 F8A1P23610 371 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 ETV3P41162 512 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 ACTR1BP42025 376 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 MLLT10P55197 1068 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 ACTR1AP61163 376 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 AP1S1P61966 158 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 DPTQ07507 201 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 BIRC2Q13490 618 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 SEPT6Q14141 434 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 MAP7Q14244 749 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 RFTN1Q14699 578 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-208ENST00000443046 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 TRIM72Q6ZMU5 477 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 HSD11B1LQ7Z5J1 315 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 PHF13Q86YI8 300 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-208ENST00000443046 ARHGAP12Q8IWW6 846 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 SFRP1Q8N474 314 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 MLKLQ8NB16 471 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 PSKH2Q96QS6 385 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 SELENOOQ9BVL4 669 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 GANQ9H2C0 597 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 APMAPQ9HDC9 416 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 ADAM22Q9P0K1 906 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 ABCA12Q86UK0 2595 aa14.34□□□□□ -0.11
HMGN1-208ENST00000443046 CSMD1Q96PZ7 3565 aa14.33□□□□□ -0.11
HMGN1-208ENST00000443046 DOPEY1Q5JWR5 2465 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 A0A1W2PQ67 120 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 PSMD11O00231 422 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 GFPT2O94808 682 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 KRT7P08729 469 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms