RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NLRP8Q86W28 1048 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 DTX1Q86Y01 620 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PDCD6IPQ8WUM4 868 aaKnown RBP13.79□□□□□ -0.2
PTPRE-203ENST00000442830 ZNF653Q96CK0 615 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 TAAR9Q96RI9 348 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PEBP4Q96S96 227 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 TAS2R14Q9NYV8 317 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 TAAR2Q9P1P5 351 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 RCOR3Q9P2K3 495 aaPredicted RBP13.79□□□□□ -0.2
PTPRE-203ENST00000442830 AMACRQ9UHK6 382 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 SLC17A4Q9Y2C5 497 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PPIL1Q9Y3C6 166 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 PCDHGA3Q9Y5H0 932 aa13.79□□□□□ -0.2
PTPRE-203ENST00000442830 LRRC53A6NM62 1247 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 WISP1O95388 367 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 CEACAM5P06731 702 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 HGFP14210 728 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 GM2AP17900 193 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ITIH1P19827 911 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 CSRP3P50461 194 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 MAPK10P53779 464 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 RAB15P59190 212 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 KLHL30Q0D2K2 578 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 LRP8Q14114 963 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 CYP4V2Q6ZWL3 525 aaPredicted RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ZNF765Q7L2R6 523 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ARFGAP1Q8N6T3 406 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 AVL9Q8NBF6 648 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 AGBL5Q8NDL9 886 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 OR4D9Q8NGE8 314 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 USP7Q93009 1102 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 BPIFA3Q9BQP9 254 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 DDA1Q9BW61 102 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 LGR4Q9BXB1 951 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ASPSCR1Q9BZE9 553 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 ADNPQ9H2P0 1102 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 STN1Q9H668 368 aaKnown RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 HAUS4Q9H6D7 363 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 SUFUQ9UMX1 484 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 PCDHGC4Q9Y5F7 938 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 PCDHGA4Q9Y5G9 962 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
PTPRE-203ENST00000442830 SDK2Q58EX2 2172 aa13.78□□□□□ -0.2
PTPRE-203ENST00000442830 GOLGA6CA6NDK9 693 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 GOLGA6BA6NDN3 693 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 MAFKO60675 156 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 PPFIA2O75334 1257 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 PGLSO95336 258 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 ZIC2O95409 532 aaPredicted RBP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 FGF1P05230 155 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 GOLGA6DP0CG33 693 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 SLC2A4P14672 509 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 ALDH4A1P30038 563 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 CSTF2P33240 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 MMP13P45452 471 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 GPR1P46091 355 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 GNPDA1P46926 289 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 LIMK2P53671 638 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 NFATC3Q12968 1075 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 NCAPHQ15003 741 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 TIGD7Q6NT04 549 aaPredicted RBP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 ADAMTSL4Q6UY14 1074 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 ATG14Q6ZNE5 492 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 PRICKLE2Q7Z3G6 844 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 POLNQ7Z5Q5 900 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 NRSN1Q8IZ57 195 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 NIPA2Q8N8Q9 360 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 TEFMQ96QE5 360 aaKnown RBP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 OR2M4Q96R27 311 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 EFHD1Q9BUP0 239 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 POLR1EQ9GZS1 481 aaKnown RBP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 STARD5Q9NSY2 213 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPRE-203ENST00000442830 GOLGA6AQ9NYA3 693 aa13.77□□□□□ -0.21
PTPRE-203ENST00000442830 A8MX80 341 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 C9orf172C9J069 976 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
PTPRE-203ENST00000442830 B4GAT1O43505 415 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 ECEL1O95672 775 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 ADCY8P40145 1251 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 ETV3P41162 512 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 FASLGP48023 281 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 EPHB1P54762 984 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 MAZP56270 477 aaKnown RBP13.76□□□□□ -0.21
PTPRE-203ENST00000442830 RPL26P61254 145 aaKnown RBP13.76□□□□□ -0.21
PTPRE-203ENST00000442830 CTBSQ01459 385 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 TGIF1Q15583 401 aa13.76□□□□□ -0.21
PTPRE-203ENST00000442830 HADHQ16836 314 aaKnown RBP13.76□□□□□ -0.21
PTPRE-203ENST00000442830 AMZ1Q400G9 498 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms