RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 STK40Q8N2I9 435 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 OR4L1Q8NH43 312 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 CSGALNACT1Q8TDX6 532 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 VOPP1Q96AW1 172 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 TSPAN17Q96FV3 270 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 PPP1R16AQ96I34 528 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 VPS39Q96JC1 886 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 RPL10LQ96L21 214 aaKnown RBP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 ZNF778Q96MU6 729 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 PLEKHG4BQ96PX9 1271 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 TTC1Q99614 292 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 KXD1Q9BQD3 176 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 APOL5Q9BWW9 433 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 PHF7Q9BWX1 381 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 CAPS2Q9BXY5 557 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 TNKS2Q9H2K2 1166 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 INTS9Q9NV88 658 aaKnown RBP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 DNAAF2Q9NVR5 837 aaKnown RBP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 KCTD5Q9NXV2 234 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-211ENST00000442691 IL36AQ9UHA7 158 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 SLCO3A1Q9UIG8 710 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 ZMIZ1Q9ULJ6 1067 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 ANKRD6Q9Y2G4 727 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 ZNF711Q9Y462 761 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 PSAT1Q9Y617 370 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 NUMBLQ9Y6R0 609 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 WASF2Q9Y6W5 498 aa9.09□□□□□ -0.95
NR1I3-211ENST00000442691 LAMA2P24043 3122 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 HMX2A2RU54 273 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 OTOL1A6NHN0 477 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 UPK3BL1B0FP48 263 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 UPK3BL2E5RIL1 263 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 MBTPS2O43462 519 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GLRA3O75311 464 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GJB3O75712 270 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 APOA4P06727 396 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 IGFBP4P22692 258 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 ITGB7P26010 798 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CRABP2P29373 138 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CRHR1P34998 444 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 SLC1A2P43004 574 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 TTPAP49638 278 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 KPNA2P52292 529 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 STC1P52823 247 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 IL9RQ01113 521 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CCDC15Q0P6D6 951 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 ZKSCAN8Q15776 578 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CDKN3Q16667 212 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GPR33Q49SQ1 333 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 FNDC3BQ53EP0 1204 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 FAM182AQ5T1J6 154 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 FSTL4Q6MZW2 842 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CES3Q6UWW8 571 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 KYAT3Q6YP21 454 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 RGS9BPQ6ZS82 235 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 TRMT11Q7Z4G4 463 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 NAT16Q8N8M0 369 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 RAB3IL1Q8TBN0 382 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GRIN3AQ8TCU5 1115 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 DENND1AQ8TEH3 1009 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 OR8D1Q8WZ84 308 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 HDAC10Q969S8 669 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 RAB7BQ96AH8 199 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CDKN2AIPNLQ96HQ2 116 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 ZFYVE19Q96K21 471 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GPR63Q9BZJ6 419 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 PLA2G2FQ9BZM2 168 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 IQCGQ9H095 443 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 ZDHHC6Q9H6R6 413 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 BRD9Q9H8M2 597 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 IARS2Q9NSE4 1012 aaKnown RBP9.08□□□□□ -0.96
NR1I3-211ENST00000442691 CATSPERZQ9NTU4 200 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 SLC2A6Q9UGQ3 507 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 DCDC2Q9UHG0 476 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GGT7Q9UJ14 662 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 MID2Q9UJV3 735 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 GRID1Q9ULK0 1009 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 SPO11Q9Y5K1 396 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 ARL5AQ9Y689 179 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 DOCK6Q96HP0 2047 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 DOCK8Q8NF50 2099 aa9.08□□□□□ -0.96
NR1I3-211ENST00000442691 MIA3Q5JRA6 1907 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 TRBV5-4A0A0C4DH59 114 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 TTC24A2A3L6 582 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-211ENST00000442691 TBC1D3BA6NDS4 549 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 AGAP14A8MT82 685 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 TTC34A8MYJ7 566 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 PRRT4C9JH25 899 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 C1QTNF3-AMACRE9PGA6 284 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 ERVH48-1M5A8F1 160 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 COPEO14579 308 aa9.07□□□□□ -0.96
NR1I3-211ENST00000442691 CD3EAPO15446 510 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms