RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 PTSQ03393 145 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 GBE1Q04446 702 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 ILF3Q12906 894 aaKnown RBP eCLIP11.13□□□□□ -0.63
NELFE-205ENST00000441998 SLC10A2Q12908 348 aaPredicted RBP11.13□□□□□ -0.63
NELFE-205ENST00000441998 LRP8Q14114 963 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 SPIDRQ14159 915 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 TFDP2Q14188 446 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 TAZQ16635 292 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 ODF2Q5BJF6 829 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 CERCAMQ5T4B2 595 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 ZFYVE27Q5T4F4 411 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 CRTC1Q6UUV9 634 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 Q6ZVL8 140 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 RD3Q7Z3Z2 195 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 HSD11B1LQ7Z5J1 315 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 TAF8Q7Z7C8 310 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 PLD5Q8N7P1 536 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 LSM14AQ8ND56 463 aaKnown RBP11.13□□□□□ -0.63
NELFE-205ENST00000441998 CCNYQ8ND76 341 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 EXD1Q8NHP7 514 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 WDR36Q8NI36 951 aaKnown RBP11.13□□□□□ -0.63
NELFE-205ENST00000441998 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
NELFE-205ENST00000441998 PDXPQ96GD0 296 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 LIN37Q96GY3 246 aaPredicted RBP11.13□□□□□ -0.63
NELFE-205ENST00000441998 HIC2Q96JB3 615 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 SLC46A1Q96NT5 459 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 LGR4Q9BXB1 951 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
NELFE-205ENST00000441998 DPH1Q9BZG8 443 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 PCDH9Q9HC56 1237 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 THSD1Q9NS62 852 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 RAD18Q9NS91 495 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 GULP1Q9UBP9 304 aa11.13□□□□□ -0.63
NELFE-205ENST00000441998 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 PTPRBP23467 1997 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 DOCK9Q9BZ29 2069 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 TTC24A2A3L6 582 aaPredicted RBP11.12□□□□□ -0.63
NELFE-205ENST00000441998 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 PSTPIP1O43586 416 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 JCHAINP01591 159 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 FECHP22830 423 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 RBMS1P29558 406 aaKnown RBP11.12□□□□□ -0.63
NELFE-205ENST00000441998 CCKBRP32239 447 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 GPR1P46091 355 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 STC1P52823 247 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 UCNP55089 124 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 CLDN6P56747 220 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 PCBP4P57723 403 aaKnown RBP11.12□□□□□ -0.63
NELFE-205ENST00000441998 HLTFQ14527 1009 aaKnown RBP eCLIP11.12□□□□□ -0.63
NELFE-205ENST00000441998 C14orf28Q4W4Y0 310 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 PERM1Q5SV97 790 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 LRRC66Q68CR7 880 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 PDZD3Q86UT5 571 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 HEATR4Q86WZ0 1026 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 ARL14Q8N4G2 192 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 FAM46DQ8NEK8 389 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
NELFE-205ENST00000441998 AP2M1Q96CW1 435 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 TMEM74Q96NL1 305 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 MLPHQ9BV36 600 aaPredicted RBP11.12□□□□□ -0.63
NELFE-205ENST00000441998 B3GNT4Q9C0J1 378 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 STRADBQ9C0K7 418 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 TMEM168Q9H0V1 697 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 SLC25A51Q9H1U9 297 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 ABCG8Q9H221 673 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 RMI1Q9H9A7 625 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 CYP4F12Q9HCS2 524 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 SPTLC3Q9NUV7 552 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 VPS18Q9P253 973 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 PCDHB1Q9Y5F3 818 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 ENTPD2Q9Y5L3 495 aa11.12□□□□□ -0.63
NELFE-205ENST00000441998 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 A8MX80 341 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 GPR89AB7ZAQ6 455 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 TLX3O43711 291 aaPredicted RBP11.11□□□□□ -0.63
NELFE-205ENST00000441998 NOBOXO60393 691 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 EPOP01588 193 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 HLA-DQB2P05538 268 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
NELFE-205ENST00000441998 GPR89BP0CG08 455 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 MYF5P13349 255 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 GJC1P36383 396 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 MAGEA1P43355 309 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 GPR3P46089 330 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 GABREP78334 506 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 DSC2Q02487 901 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 NIPAL4Q0D2K0 466 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 SQSTM1Q13501 440 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 NR1D2Q14995 579 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 SPA17Q15506 151 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 COL28A1Q2UY09 1125 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 TEX44Q53QW1 395 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 PDPK2PQ6A1A2 396 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 RAET1GQ6H3X3 334 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 NT5DC3Q86UY8 548 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
NELFE-205ENST00000441998 CNTD1Q8N815 330 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms