RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SEPHS1P49903 392 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 TTC23LQ6PF05 361 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 SCUBE3Q8IX30 993 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 LGI2Q8N0V4 545 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 OR6B3Q8NGW1 331 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 ZNF669Q96BR6 464 aaPredicted RBP16.81■□□□□ 0.28
PMS1-213ENST00000441310 OMDQ99983 421 aa16.81■□□□□ 0.28
PMS1-213ENST00000441310 HOXC11O43248 304 aaPredicted RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 TREHO43280 583 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 ABCB7O75027 752 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 SNRPB2P08579 225 aaKnown RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 MYL3P08590 195 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 JUNBP17275 347 aaPredicted RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 TUBA3CQ13748 450 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 PPP1R26Q5T8A7 1209 aaPredicted RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 TRNP1Q6NT89 227 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 SLC16A12Q6ZSM3 486 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 FAM35AQ86V20 835 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 MFSD4AQ8N468 514 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 TRIB2Q92519 343 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 FCRL3Q96P31 734 aaPredicted RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 MIR1-1HGQ9H1L0 117 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 PIN4Q9Y237 131 aaKnown RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 CITO14578 2027 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 CCRL2O00421 344 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 KMOO15229 486 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 GPC4O75487 556 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 ALBP02768 609 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.283e-6■■■□□ 15.5
PMS1-213ENST00000441310 ECT2LQ008S8 904 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 FAM110CQ1W6H9 321 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 HEATR6Q6AI08 1181 aaKnown RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 R3HCC1LQ7Z5L2 792 aaKnown RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 SPATA6LQ8N4H0 392 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 GTF3C2Q8WUA4 911 aaPredicted RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 FKBP10Q96AY3 582 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 CDK5RAP1Q96SZ6 601 aaKnown RBP16.8■□□□□ 0.28
PMS1-213ENST00000441310 LHX5Q9H2C1 402 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 WDR70Q9NW82 654 aa16.8■□□□□ 0.28
PMS1-213ENST00000441310 SLCO1B7G3V0H7 640 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 M0R3G1 203 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 GPD1P21695 349 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 LIMK2P53671 638 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 SEMA5AQ13591 1074 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 MAPRE2Q15555 327 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 SIGIRRQ6IA17 410 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 ZYG11AQ6WRX3 759 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 SPRED1Q7Z699 444 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 TLK2Q86UE8 772 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 IFNEQ86WN2 208 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 LRRC49Q8IUZ0 686 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 KDM1BQ8NB78 822 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 ANKK1Q8NFD2 765 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 TXNDC15Q96J42 360 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 NT5C1AQ9BXI3 368 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 MAGEB5Q9BZ81 275 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 DPEP3Q9H4B8 488 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 BAG5Q9UL15 447 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 PLXNB2O15031 1838 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 CCDC78A2IDD5 438 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 UBDO15205 165 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 NRP2O60462 931 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 RECQL4O94761 1208 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 MFN2O95140 757 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 POLBP06746 335 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 TRPC1P48995 793 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 IST1P53990 364 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 POU5F1BQ06416 359 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 CLEC14AQ86T13 490 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 ADCK1Q86TW2 530 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 BPHLQ86WA6 291 aaPredicted RBP16.79■□□□□ 0.28
PMS1-213ENST00000441310 ENPP5Q9UJA9 477 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 NME7Q9Y5B8 376 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 INPP4BO15327 924 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 MTHFD1P11586 935 aaKnown RBP16.79■□□□□ 0.28
PMS1-213ENST00000441310 AXLP30530 894 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 CYP51A1Q16850 503 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 PMF1Q6P1K2 205 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 LINC00523Q86TU6 105 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 SPARTQ8N0X7 666 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 KCTD4Q8WVF5 259 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 EMID1Q96A84 441 aaPredicted RBP16.79■□□□□ 0.28
PMS1-213ENST00000441310 TSNARE1Q96NA8 513 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 SLCO3A1Q9UIG8 710 aa16.79■□□□□ 0.28
PMS1-213ENST00000441310 NME4O00746 187 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 USP12O75317 370 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 RFPL2O75678 378 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 MPOP05164 745 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 SBK3P0C264 359 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 VDRP11473 427 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 PRKCAP17252 672 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 ZNF143P52747 638 aaPredicted RBP16.78■□□□□ 0.28
PMS1-213ENST00000441310 RACK1P63244 317 aaKnown RBP16.78■□□□□ 0.28
PMS1-213ENST00000441310 TBPL2Q6SJ96 375 aa16.78■□□□□ 0.28
PMS1-213ENST00000441310 RALGPS2Q86X27 583 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms