RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 RPLP0P05388 317 aaKnown RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 CEACAM5P06731 702 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 CCNB1P14635 433 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 CA4P22748 312 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 SKOR1P84550 965 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 GBE1Q04446 702 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 ITKQ08881 620 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 EIF3IQ13347 325 aaKnown RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 HLTFQ14527 1009 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 C14orf28Q4W4Y0 310 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 LRRC66Q68CR7 880 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 RAET1GQ6H3X3 334 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 VSIG1Q86XK7 387 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 RAVER1Q8IY67 606 aaKnown RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 KIAA1524Q8TCG1 905 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 GPBAR1Q8TDU6 330 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 BBC3Q96PG8 261 aaPredicted RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 TDRD1Q9BXT4 1180 aaKnown RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 SYNDIG1Q9H7V2 258 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 CARS2Q9HA77 564 aaKnown RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 TRNAU1APQ9NX07 287 aaKnown RBP16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 DTLQ9NZJ0 730 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 RP1P56715 2156 aa16.25■□□□□ 0.19
SNRPD3-204ENST00000439775 PTPRQQ9UMZ3 2332 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 A0A1W2PQM1 296 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CAPN8A6NHC0 703 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 B4DGG1 531 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 TMX2-CTNND1H3BSU7 103 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 NUDT21O43809 227 aaKnown RBP16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 AKR1B10O60218 316 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 MFAP3LO75121 409 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 MAP3K6O95382 1288 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 SOD1P00441 154 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 ITGA2BP08514 1039 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 TPM1P09493 284 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CTPS1P17812 591 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CCKBRP32239 447 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 UCNP55089 124 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 RPL26P61254 145 aaKnown RBP16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CCL7P80098 99 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 DSC2Q02487 901 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 ILF3Q12906 894 aaKnown RBP eCLIP16.24■□□□□ 0.194e-7■□□□□ 8.9
SNRPD3-204ENST00000439775 IHHQ14623 411 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 PTPRRQ15256 657 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 ZNF765Q7L2R6 523 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CLEC14AQ86T13 490 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 NLRP8Q86W28 1048 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CCNJLQ8IV13 435 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 ARL14Q8N4G2 192 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 CCL4L1Q8NHW4 92 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 ARRDC2Q8TBH0 407 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 KCNE4Q8WWG9 221 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 ZNF830Q96NB3 372 aaPredicted RBP16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 GSDMCQ9BYG8 508 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 DPH1Q9BZG8 443 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 LRRN3Q9H3W5 708 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 DPEP2Q9H4A9 486 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 RBM22Q9NW64 420 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 MOSPD1Q9UJG1 213 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 RPL26L1Q9UNX3 145 aaKnown RBP16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 SLC17A4Q9Y2C5 497 aa16.24■□□□□ 0.19
SNRPD3-204ENST00000439775 GOLGA6CA6NDK9 693 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 GOLGA6BA6NDN3 693 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 MTA2O94776 668 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 FUCA1P04066 466 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 HLA-DQB2P05538 268 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 PYGLP06737 847 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 IVLP07476 585 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 GOLGA6DP0CG33 693 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 KDELR1P24390 212 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 ARHGAP25P42331 645 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 EPHB1P54762 984 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 SLC10A2Q12908 348 aaPredicted RBP16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 COL9A2Q14055 689 aaPredicted RBP16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 BROXQ5VW32 411 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 ADAMTSL4Q6UY14 1074 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 SPRED1Q7Z699 444 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 B3GNT8Q7Z7M8 397 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 C17orf82Q86X59 251 aaPredicted RBP16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 NRROSQ86YC3 692 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 RHOT2Q8IXI1 618 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 CCDC13Q8IYE1 715 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 PLD5Q8N7P1 536 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 SLC35G2Q8TBE7 412 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 RAPGEF5Q92565 580 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 AP2M1Q96CW1 435 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 CCDC97Q96F63 343 aaPredicted RBP16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 SCARF2Q96GP6 870 aaPredicted RBP16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 NAF1Q96HR8 494 aaKnown RBP16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 TMEM74Q96NL1 305 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 RNF157Q96PX1 679 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 LYSMD1Q96S90 227 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 STRADBQ9C0K7 418 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 GOLGA6AQ9NYA3 693 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 SUFUQ9UMX1 484 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 TTLL3Q9Y4R7 772 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 RNF215Q9Y6U7 377 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 SHROOM3Q8TF72 1996 aa16.23■□□□□ 0.19
SNRPD3-204ENST00000439775 TEX51A0A1B0GUA7 166 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms