RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CEACAM1P13688 526 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 NME1P15531 152 aaKnown RBP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 KELP23276 732 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 GRK6P43250 576 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 GDF10P55107 478 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 KIAA1024LP59773 190 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 HNRNPKP61978 463 aaKnown RBP eCLIP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 NFATC4Q14934 902 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 SIRPB2Q5JXA9 342 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 PRAMEF14Q5SWL7 426 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 LYSMD3Q7Z3D4 306 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 TMC3Q7Z5M5 1100 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 PLA2G15Q8NCC3 412 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 BTN2A2Q8WVV5 523 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 OSBPL9Q96SU4 736 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 GORASP1Q9BQQ3 440 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 CDH19Q9H159 772 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 ABCG8Q9H221 673 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 RAD18Q9NS91 495 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 SNX12Q9UMY4 172 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 ZNF711Q9Y462 761 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 LRRK1Q38SD2 2015 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 SH3BP5O60239 455 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 KCNK5O95279 499 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 ADRA1AP35348 466 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 ACTN2P35609 894 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 SPINT3P49223 89 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 BLKP51451 505 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 GNG11P61952 73 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 IL9RQ01113 521 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 EIF2B5Q13144 721 aaKnown RBP11.79□□□□□ -0.52
HSPG2-206ENST00000439717 SNX1Q13596 522 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 TPRG1LQ5T0D9 272 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 RAET1GQ6H3X3 334 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 RANBP10Q6VN20 620 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 KDM7AQ6ZMT4 941 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 KANSL1Q7Z3B3 1105 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 DGLUCYQ7Z3D6 616 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 DEFB124Q8NES8 71 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 ACTRT1Q8TDG2 376 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 SETD7Q8WTS6 366 aaKnown RBP11.79□□□□□ -0.52
HSPG2-206ENST00000439717 FUBP1Q96AE4 644 aaKnown RBP11.79□□□□□ -0.52
HSPG2-206ENST00000439717 AP2M1Q96CW1 435 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 TBATAQ96M53 351 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 WDR92Q96MX6 357 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 FICDQ9BVA6 458 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 TEX101Q9BY14 249 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 GPR63Q9BZJ6 419 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 FAM83DQ9H4H8 585 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 WDR26Q9H7D7 661 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 PHPT1Q9NRX4 125 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-206ENST00000439717 DNAJC28Q9NX36 388 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 NFKBIL1Q9UBC1 381 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-206ENST00000439717 FEZ2Q9UHY8 353 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-206ENST00000439717 PCOLCE2Q9UKZ9 415 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 OR1A2Q9Y585 309 aa11.79□□□□□ -0.52
HSPG2-206ENST00000439717 TMEM131Q92545 1883 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 A0A0U1RQS6 177 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 NEMP2A6NFY4 417 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 GOLGA8CPA6NN73 597 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 K7ESM1 405 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 PGRMC1O00264 195 aaKnown RBP11.78□□□□□ -0.52
HSPG2-206ENST00000439717 TNFRSF10CO14798 259 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CBFA2T3O75081 653 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 PIAS2O75928 621 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 METTL18O95568 372 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 AGTP01019 485 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 IFNB1P01574 187 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 PIRTP0C851 137 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 MYCLP1P12525 358 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-206ENST00000439717 JUNDP17535 347 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 TCP1P17987 556 aaKnown RBP11.78□□□□□ -0.52
HSPG2-206ENST00000439717 DGKAP23743 735 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 HMGCLP35914 325 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 FDFT1P37268 417 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CHRNA4P43681 627 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 GPR1P46091 355 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 NOVA1P51513 510 aaKnown RBP11.78□□□□□ -0.52
HSPG2-206ENST00000439717 DCDC1P59894 354 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 PPARDQ03181 441 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 BNIP3Q12983 259 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 KCTD11Q693B1 232 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 ENPP7Q6UWV6 458 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 ADAMTSL4Q6UY14 1074 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 C4orf22Q6V702 233 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 RFLNAQ6ZTI6 216 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 ERMP1Q7Z2K6 904 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 HEATR4Q86WZ0 1026 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 GATAD2AQ86YP4 633 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 SLC25A41Q8N5S1 370 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 PRELID2Q8N945 189 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CCDC89Q8N998 374 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 RHBDD1Q8TEB9 315 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 EID2BQ96D98 161 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 MS4A14Q96JA4 679 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CDC6Q99741 560 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 TBL1YQ9BQ87 522 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 LRRC40Q9H9A6 602 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms