RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 RGS14O43566 566 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ITM2AO43736 263 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 SLC28A2O43868 658 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 IPO7O95373 1038 aaKnown RBP3.57□□□□□ -1.84
VPS41-207ENST00000439468 FTCDO95954 541 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ACAA1P09110 424 aaPredicted RBP3.57□□□□□ -1.84
VPS41-207ENST00000439468 CSH1P0DML2 217 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 CSH2P0DML3 217 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 AKR1B1P15121 316 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ZNF182P17025 639 aaPredicted RBP3.57□□□□□ -1.84
VPS41-207ENST00000439468 GABRB1P18505 474 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 MYF6P23409 242 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 RAD52P43351 418 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 RFX2P48378 723 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 RASSF2P50749 326 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ZP1P60852 638 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ABATP80404 500 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 GPS2Q13227 327 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 CRYMQ14894 314 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ASIC2Q16515 512 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 OTUD1Q5VV17 481 aaPredicted RBP3.57□□□□□ -1.84
VPS41-207ENST00000439468 NCAPH2Q6IBW4 605 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 GLDNQ6ZMI3 551 aaPredicted RBP3.57□□□□□ -1.84
VPS41-207ENST00000439468 MTSS1LQ765P7 747 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ADHFE1Q8IWW8 467 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 CCDC105Q8IYK2 499 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 BEST2Q8NFU1 509 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 NEK9Q8TD19 979 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 TRIB2Q92519 343 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ARHGEF26Q96DR7 871 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 CALML4Q96GE6 196 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 SLITRK1Q96PX8 696 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 FAM110AQ9BQ89 295 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 TMEM47Q9BQJ4 181 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 IFIH1Q9BYX4 1025 aaKnown RBP3.57□□□□□ -1.84
VPS41-207ENST00000439468 CCDC68Q9H2F9 335 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 NDST4Q9H3R1 872 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 SH2D4AQ9H788 454 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 CLIC5Q9NZA1 410 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 SLC9A2Q9UBY0 812 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 FBXL17Q9UF56 701 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 RABGAP1Q9Y3P9 1069 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 STON1Q9Y6Q2 735 aa3.57□□□□□ -1.84
VPS41-207ENST00000439468 ARHGEF40Q8TER5 1519 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 A8MZ25 164 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 PRR23D1E9PI22 279 aaPredicted RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 VCYO14598 125 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 SLC25A12O75746 678 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 BEST1O76090 585 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 KCNK5O95279 499 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 PGM3O95394 542 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 HOXB5P09067 269 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 PRR23D2P0DMB1 279 aaPredicted RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 PLA2G2AP14555 144 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 NAGAP17050 411 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 TNFRSF8P28908 595 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 PIK3CAP42336 1068 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 PCYT1AP49585 367 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 IFI35P80217 286 aaPredicted RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 ROR2Q01974 943 aaKnown RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 CHAF1BQ13112 559 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 ACVR2BQ13705 512 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 ASTE1Q2TB18 679 aaPredicted RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 USP41Q3LFD5 358 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 ZSCAN23Q3MJ62 389 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 RAB41Q5JT25 222 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 PAPPA-AS1Q5QFB9 102 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 LINGO2Q7L985 606 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 SHFQ7M4L6 423 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 GALNT5Q7Z7M9 940 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 WDR63Q8IWG1 891 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 ADGRF2Q8IZF7 708 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 SPATA6LQ8N4H0 392 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 IQCF1Q8N6M8 205 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 HMGCLL1Q8TB92 370 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 POMGNT1Q8WZA1 660 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 TMEM68Q96MH6 324 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 CTAGE1Q96RT6 745 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 GAD1Q99259 594 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 NUDT16L1Q9BRJ7 211 aaKnown RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 DCLK3Q9C098 648 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 CATSPERBQ9H7T0 1116 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 HINT3Q9NQE9 182 aaKnown RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 RPS6KA6Q9UK32 745 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 FZD10Q9ULW2 581 aa3.56□□□□□ -1.84
VPS41-207ENST00000439468 SRPRBQ9Y5M8 271 aaKnown RBP3.56□□□□□ -1.84
VPS41-207ENST00000439468 CUX2O14529 1486 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 A0A1B0GVM2 712 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 OR6C75A6NL08 312 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 A8MV72 311 aaPredicted RBP3.55□□□□□ -1.84
VPS41-207ENST00000439468 HSPA12AO43301 675 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 ZIC3O60481 467 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 MTA2O94776 668 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 PAPSS2O95340 614 aaPredicted RBP3.55□□□□□ -1.84
VPS41-207ENST00000439468 VNN2O95498 520 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 STARD3NLO95772 234 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 RB1P06400 928 aa3.55□□□□□ -1.84
VPS41-207ENST00000439468 SELLP14151 372 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms