RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 DSG4Q86SJ6 1040 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 FBXO30Q8TB52 745 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 RBBP8Q99708 897 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC39A8Q9C0K1 460 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC38A7Q9NVC3 462 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZDHHC7Q9NXF8 308 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 FBXW11Q9UKB1 542 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CNTRLQ7Z7A1 2325 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 A0A087WXM4 84 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 A0A1W2PQH9 124 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 SH3PXD2BA1X283 911 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 SYCE1LA8MT33 242 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 A8MX80 341 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 H3BNH8 94 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 COQ9O75208 318 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 GJB3O75712 270 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 F2P00734 622 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 IL10P22301 178 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 C1QTNF8P60827 252 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRIM25Q14258 630 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 RBM20Q5T481 1227 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ELMSAN1Q6PJG2 1045 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 LRRTM3Q86VH5 581 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 PGAM4Q8N0Y7 254 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 CNTD1Q8N815 330 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 RP9Q8TA86 221 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 TBL1YQ9BQ87 522 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 DRC3Q9H069 523 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 RBM38Q9H0Z9 239 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 FETUBQ9UGM5 382 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM50BQ9Y247 325 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 KIF13BQ9NQT8 1826 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 G3V2L1 256 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 H3BMQ9 156 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 GRID2O43424 1007 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 DENRO43583 198 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 TIMM44O43615 452 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ODC1P11926 461 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 TSHRP16473 764 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF26P17031 533 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 MRPS6P82932 125 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 SGO1Q5FBB7 561 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF789Q5FWF6 425 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 GALNT5Q7Z7M9 940 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 PIM3Q86V86 326 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 CEP97Q8IW35 865 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 NCLNQ969V3 563 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 COG8Q96MW5 612 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 NAT9Q9BTE0 207 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ARHGAP39Q9C0H5 1083 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 NCKIPSDQ9NZQ3 722 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM8A1Q9UBU6 413 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 VPS4AQ9UN37 437 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ATP11BQ9Y2G3 1177 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ACTL7AQ9Y615 435 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 DHRS12A0PJE2 317 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 TCAF2A6NFQ2 919 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 ALBP02768 609 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 GJA8P48165 433 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 BCAP31P51572 246 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 LIMK2P53671 638 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 DSC2Q02487 901 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 GALNT3Q14435 633 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 SPRYD7Q5W111 196 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 NEPROQ6NW34 567 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 C4orf22Q6V702 233 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 DHRSXQ8N5I4 330 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 AMBNQ9NP70 447 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 SEMA4BQ9NPR2 832 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 DNAJB4Q9UDY4 337 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 RAP2CQ9Y3L5 183 aa9.94□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 J3KR12 359 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 MATN2O00339 956 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF195O14628 629 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 DDHD2O94830 711 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 GFAPP14136 432 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 TGFBR1P36897 503 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 OXCT1P55809 520 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 WNT3AP56704 352 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM110CQ1W6H9 321 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 TIGD2Q4W5G0 525 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 METTL21CQ5VZV1 264 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 HMBOX1Q6NT76 420 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 TOP6BLQ8N6T0 577 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 TXNDC5Q8NBS9 432 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 CDC26Q8NHZ8 85 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 HDAC10Q969S8 669 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 CORO1BQ9BR76 489 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 ROGDIQ9GZN7 287 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 TOR3AQ9H497 397 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 PNPLA8Q9NP80 782 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLTPD2A6NH11 291 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 BCAS2O75934 225 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 MFN2O95140 757 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms