RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KIAA1586Q9HCI6 787 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 SEC14L3Q9UDX4 400 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 NOL7Q9UMY1 257 aaKnown RBP11.05□□□□□ -0.64
RTN4-211ENST00000438462 MEMO1Q9Y316 297 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 CYP46A1Q9Y6A2 500 aa11.05□□□□□ -0.64
RTN4-211ENST00000438462 INTS1Q8N201 2190 aaKnown RBP11.04□□□□□ -0.64
RTN4-211ENST00000438462 PCM1Q15154 2024 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 NUP210LQ5VU65 1888 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 RYR3Q15413 4870 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 CTAG2O75638 210 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 APOEP02649 317 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 UGT2B4P06133 528 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 CD58P19256 250 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 DMPKQ09013 629 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 CBLBQ13191 982 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 NFATC2Q13469 925 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 TLR1Q15399 786 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 CARD16Q5EG05 197 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
RTN4-211ENST00000438462 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 TTC7BQ86TV6 843 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 RAB43Q86YS6 212 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 SLC9A9Q8IVB4 645 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
RTN4-211ENST00000438462 SDCCAG3Q96C92 435 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 FER1L6-AS2Q96M78 137 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 PRMT1Q99873 361 aaKnown RBP11.04□□□□□ -0.64
RTN4-211ENST00000438462 LGR4Q9BXB1 951 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 KRTAP17-1Q9BYP8 105 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 TM6SF2Q9BZW4 377 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 CLEC4MQ9H2X3 399 aaPredicted RBP11.04□□□□□ -0.64
RTN4-211ENST00000438462 STMN3Q9NZ72 180 aa11.04□□□□□ -0.64
RTN4-211ENST00000438462 OTX2P32243 289 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 ACTR1BP42025 376 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 GNPDA1P46926 289 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 SLC8A3P57103 927 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 ACTR1AP61163 376 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 CTBSQ01459 385 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 HHEXQ03014 270 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 GPS2Q13227 327 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 TMCO4Q5TGY1 634 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 RPUSD3Q6P087 351 aaKnown RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 PLXDC1Q8IUK5 500 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 RYBPQ8N488 228 aaPredicted RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 PCDH20Q8N6Y1 951 aaKnown RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 DCAF4L2Q8NA75 395 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 BTN2A3PQ96KV6 586 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 RPRD1AQ96P16 312 aaPredicted RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 GBP5Q96PP8 586 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 GPATCH1Q9BRR8 931 aaKnown RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 SPRTNQ9H040 489 aaPredicted RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 TRNAU1APQ9NX07 287 aaKnown RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 HECAQ9UBI9 543 aaPredicted RBP11.03□□□□□ -0.64
RTN4-211ENST00000438462 HS3ST4Q9Y661 456 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 SLC30A1Q9Y6M5 507 aa11.03□□□□□ -0.64
RTN4-211ENST00000438462 XPO1O14980 1071 aaKnown RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 CPNE3O75131 537 aaKnown RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 ATE1O95260 518 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 C9P02748 559 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 RAF1P04049 648 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 RAB40ALP0C0E4 278 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 LCP1P13796 627 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 MST1P26927 711 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 SERPINH1P50454 418 aaKnown RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 TOB1P50616 345 aaPredicted RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 EPHA4P54764 986 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 TUBB3Q13509 450 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 ALCAMQ13740 583 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 ZC3H12AQ5D1E8 599 aaKnown RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 LCN10Q6JVE6 187 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 TAC4Q86UU9 113 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 TGM7Q96PF1 710 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 NDC1Q9BTX1 674 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 CEP44Q9C0F1 390 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 FOXP1Q9H334 677 aaPredicted RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 WASH6PQ9NQA3 447 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 C1GALT1Q9NS00 363 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 RARRES3Q9UL19 164 aa11.02□□□□□ -0.65
RTN4-211ENST00000438462 FCF1Q9Y324 198 aaKnown RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 KMT2CQ8NEZ4 4911 aaKnown RBP11.02□□□□□ -0.65
RTN4-211ENST00000438462 RASSF9O75901 435 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 LTFP02788 710 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 FUCA1P04066 466 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 RHOCP08134 193 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 PYGMP11217 842 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 NKX6-1P78426 367 aaPredicted RBP11.01□□□□□ -0.65
RTN4-211ENST00000438462 PEX6Q13608 980 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 SYCP1Q15431 976 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 SGSM1Q2NKQ1 1148 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 FOXD4L6Q3SYB3 417 aaPredicted RBP11.01□□□□□ -0.65
RTN4-211ENST00000438462 TMEM52BQ4KMG9 183 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 SHEQ5VZ18 495 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 FBXL22Q6P050 247 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 CYB5D1Q6P9G0 228 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 IGFL2Q6UWQ7 119 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 FOXD4L3Q6VB84 417 aaPredicted RBP11.01□□□□□ -0.65
RTN4-211ENST00000438462 SFRP1Q8N474 314 aa11.01□□□□□ -0.65
RTN4-211ENST00000438462 ANKRD52Q8NB46 1076 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms