RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 PRAMEP78395 509 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 CNTN1Q12860 1018 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 SRSF5Q13243 272 aaKnown RBP17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 CRYMQ14894 314 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 LONRF1Q17RB8 773 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 KLHL38Q2WGJ6 581 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 TMEM52BQ4KMG9 183 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 ANKRD20A4Q4UJ75 823 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 KIAA1161Q6NSJ0 714 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 KIAA1324Q6UXG2 1013 aaKnown RBP17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 TMEM92Q6UXU6 159 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 ANKMY2Q8IV38 441 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 GSPT2Q8IYD1 628 aaKnown RBP17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 NRSN1Q8IZ57 195 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 PGBD3Q8N328 593 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 UBLCP1Q8WVY7 318 aaPredicted RBP17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 SGSM3Q96HU1 749 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 TTC1Q99614 292 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 C1QTNF7Q9BXJ2 289 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 FUT8Q9BYC5 575 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 VPS37BQ9H9H4 285 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 CHRAC1Q9NRG0 131 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 NLE1Q9NVX2 485 aaPredicted RBP17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 PIH1D1Q9NWS0 290 aaKnown RBP17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 B4GALT6Q9UBX8 382 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 RALGAPA1Q6GYQ0 2036 aa17.69■□□□□ 0.42
CCDC144A-209ENST00000436374 LRRC72A6NJI9 287 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 H7C0S8 307 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 RIPK2O43353 540 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 RPP40O75818 363 aaKnown RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 IGLV3-19P01714 112 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 ALPIP09923 528 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 NDUFV2P19404 249 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 NUDT1P36639 197 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 ACVR1Q04771 509 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 LPAL2Q16609 132 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 KYNUQ16719 465 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 AARS2Q5JTZ9 985 aaKnown RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 PIP5KL1Q5T9C9 394 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 LRRC66Q68CR7 880 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 CRTC1Q6UUV9 634 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 HDXQ7Z353 690 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 CYP2U1Q7Z449 544 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 WDR5BQ86VZ2 330 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 ZSWIM9Q86XI8 627 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 HMGB4Q8WW32 186 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 ZNF669Q96BR6 464 aaPredicted RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 CFAP36Q96G28 342 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 C9orf72Q96LT7 481 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 PWWP2AQ96N64 755 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 PLEKHG4BQ96PX9 1271 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 CYTH2Q99418 400 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 FAM167BQ9BTA0 163 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 ACBD3Q9H3P7 528 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 LRRC4CQ9HCJ2 640 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 PARD6AQ9NPB6 346 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 ITM2CQ9NQX7 267 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 TREX1Q9NSU2 369 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 NINJ2Q9NZG7 142 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 NFKBIL1Q9UBC1 381 aaPredicted RBP17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 EBF1Q9UH73 591 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 VPS9D1Q9Y2B5 631 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 FADS3Q9Y5Q0 445 aa17.68■□□□□ 0.42
CCDC144A-209ENST00000436374 CACNA1AO00555 2505 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 MYO18AQ92614 2054 aaKnown RBP17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 CCDC163A0A0D9SF12 145 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 A0A1W2PP55 124 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 NPIPB15A6NHN6 443 aaPredicted RBP17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 AXIN1O15169 862 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 PLRG1O43660 514 aaKnown RBP17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 GABRG2P18507 467 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 DRD3P35462 400 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 ZNF140P52738 457 aaPredicted RBP17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 STC1P52823 247 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 DCDC1P59894 354 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 RPS21P63220 83 aaKnown RBP17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 THOC5Q13769 683 aaKnown RBP17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 STAT4Q14765 748 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 AGBL4Q5VU57 503 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 AFTPHQ6ULP2 937 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 UNC5AQ6ZN44 842 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 LYSMD3Q7Z3D4 306 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 MPP5Q8N3R9 675 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 TTC30BQ8N4P2 665 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 AADATQ8N5Z0 425 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 MDGA1Q8NFP4 955 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 HHIPQ96QV1 700 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 BTBD1Q9H0C5 482 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 IL17CQ9P0M4 197 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 SPO11Q9Y5K1 396 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 ARL5AQ9Y689 179 aa17.67■□□□□ 0.42
CCDC144A-209ENST00000436374 SDK1Q7Z5N4 2213 aa17.66■□□□□ 0.42
CCDC144A-209ENST00000436374 NUDT17P0C025 328 aa17.66■□□□□ 0.42
CCDC144A-209ENST00000436374 PIRTP0C851 137 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms