RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LTFP02788 710 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CKMP06732 381 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CSH1P0DML2 217 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CSH2P0DML3 217 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CORO1AP31146 461 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 UQCRC1P31930 480 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NAMPTP43490 491 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 OR3A3P47888 321 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 DGKQP52824 942 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GUCA2AQ02747 115 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 OVGP1Q12889 678 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 IL24Q13007 206 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 VEZF1Q14119 521 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TRAM2Q15035 370 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NR6A1Q15406 480 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM44Q2T9K0 475 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HKDC1Q2TB90 917 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF19Q5SWL8 479 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GPR153Q6NV75 609 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TTC27Q6P3X3 843 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NDUFAF7Q7L592 441 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SLC13A5Q86YT5 568 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RBBP8NLQ8NC74 664 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TSEN2Q8NCE0 465 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NCSTNQ92542 709 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TNFRSF14Q92956 283 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF707Q96C28 371 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC46Q96FV0 321 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 LRFN5Q96NI6 719 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 EGFL8Q99944 293 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FUCA2Q9BTY2 467 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TIPINQ9BVW5 301 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF416Q9BWM5 594 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CDK19Q9BWU1 502 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RACGAP1Q9H0H5 632 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PCED1AQ9H1Q7 454 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ELOVL6Q9H5J4 265 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CABP2Q9NPB3 220 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CATSPERZQ9NTU4 200 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SDHAF2Q9NX18 166 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MARK1Q9P0L2 795 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 AAR2Q9Y312 384 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 UTP11Q9Y3A2 253 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 EVPLLA8MZ36 301 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 H3BMM5 538 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 H7C2Y5 167 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 OGTO15294 1046 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ZWINTO95229 277 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PCSK2P16519 638 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF12P17014 697 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TYRP1P17643 537 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CPT2P23786 658 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 AZGP1P25311 298 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NSFP46459 744 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MBTD1Q05BQ5 628 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CHIT1Q13231 466 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PMS2P11Q13670 270 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 NFIXQ14938 502 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FASTKD3Q14CZ7 662 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC14Q15048 493 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 DGKDQ16760 1214 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MTHFSDQ2M296 383 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PPM1LQ5SGD2 360 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 AGBL2Q5U5Z8 902 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HACD4Q5VWC8 232 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 HEPHL1Q6MZM0 1159 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 FAM111BQ6SJ93 734 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 DHFR2Q86XF0 187 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC103Q8IW40 242 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ARHGAP12Q8IWW6 846 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ADSSL1Q8N142 457 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 WDSUB1Q8N9V3 476 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 C8orf58Q8NAV2 365 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 OR2L3Q8NG85 312 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ADAMTS18Q8TE60 1221 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TRAPPC12Q8WVT3 735 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 DPF1Q92782 380 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GATA6Q92908 595 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 RIT1Q92963 219 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PAGE5Q96GU1 130 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CDRT15Q96T59 188 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 ZBTB18Q99592 522 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PHB2Q99623 299 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC3Q9BQI4 270 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SPXQ9BT56 116 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 BRIP1Q9BX63 1249 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 OR2B2Q9GZK3 357 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 SLC25A18Q9H1K4 315 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MAGEH1Q9H213 219 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TAF1DQ9H5J8 278 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 TMEM138Q9NPI0 162 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 CENPMQ9NSP4 180 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 IMPACTQ9P2X3 320 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 EXTL2Q9UBQ6 330 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GGA1Q9UJY5 639 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 PIN4Q9Y237 131 aaKnown RBP5.37□□□□□ -1.55
PTPN4-203ENST00000430976 GPR45Q9Y5Y3 372 aa5.37□□□□□ -1.55
PTPN4-203ENST00000430976 MICAL3Q7RTP6 2002 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 SMIM31A0A1B0GVY4 71 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 A0A1W2PQ09 198 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms