RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 H3BM21 787 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 CCDC188H7C350 402 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 RAD51BO15315 384 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 CTIFO43310 598 aaKnown RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 VPS4BO75351 444 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 LATS1O95835 1130 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 RPLP0P05388 317 aaKnown RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 CCR1P32246 355 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 TBX4P57082 545 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 NRG1Q02297 640 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 EIF2B5Q13144 721 aaKnown RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 DPYSQ14117 519 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 FGL2Q14314 439 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 KRT81Q14533 505 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 LACTB2Q53H82 288 aaPredicted RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 SLC9A4Q6AI14 798 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 PARGQ86W56 976 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 HORMAD1Q86X24 394 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 PYROXD2Q8N2H3 581 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 SDR16C5Q8N3Y7 309 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 MMGT1Q8N4V1 131 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 PQLC3Q8N755 202 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 KCTD6Q8NC69 237 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 CCDC74AQ96AQ1 378 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 CSPG4P5Q96PW8 444 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 AP1M1Q9BXS5 423 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 MAGEB5Q9BZ81 275 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 TKTL2Q9H0I9 626 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 VPS4AQ9UN37 437 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 R3HDM2Q9Y2K5 976 aaKnown RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 DIDO1Q9BTC0 2240 aaKnown RBP10.15□□□□□ -0.78
ATG4B-212ENST00000430617 DOCK4Q8N1I0 1966 aa10.15□□□□□ -0.78
ATG4B-212ENST00000430617 MTORP42345 2549 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 FAM72CH0Y354 149 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 KRIT1O00522 736 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 NKX2-8O15522 239 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 PHF2O75151 1096 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 PAGE1O75459 146 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 CELA2BP08218 269 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 PRF1P14222 555 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 RPIAP49247 311 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 ZNF135P52742 658 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 CDH18Q13634 790 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 LLGL1Q15334 1064 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 ANKRD20A8PQ5CZ79 823 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 PPP6R3Q5H9R7 873 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 FAM72AQ5TYM5 149 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 NUGGCQ68CJ6 796 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 FAM72DQ6L9T8 149 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 TTC27Q6P3X3 843 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 FAM72BQ86X60 149 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 DCP2Q8IU60 420 aaKnown RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 ZNF683Q8IZ20 524 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 PLD5Q8N7P1 536 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 HJURPQ8NCD3 748 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 PCDH19Q8TAB3 1148 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 MAIP1Q8WWC4 291 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 RNF157Q96PX1 679 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 HAPLN3Q96S86 360 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 CPEB1Q9BZB8 566 aaKnown RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 CLPBQ9H078 707 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 WDCPQ9H6R7 721 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 CUEDC1Q9NWM3 386 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 CWC15Q9P013 229 aaKnown RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 XPO7Q9UIA9 1087 aaKnown RBP10.14□□□□□ -0.79
ATG4B-212ENST00000430617 TP53TG5Q9Y2B4 290 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 SNX10Q9Y5X0 201 aa10.14□□□□□ -0.79
ATG4B-212ENST00000430617 GOLGA6L10A0A0M3HER8 536 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 H3BRJ5 948 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 TMX2-CTNND1H3BSU7 103 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 APOC4-APOC2K7ER74 178 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 YY2O15391 372 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 DUX1O43812 170 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 ACSL4O60488 711 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 CST8O60676 142 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 TJP3O95049 919 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 APOEP02649 317 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 APOC2P02655 101 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 CTSLP07711 333 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 SLC2A3P11169 496 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 PECAM1P16284 738 aaPredicted RBP10.13□□□□□ -0.79
ATG4B-212ENST00000430617 HTR7P34969 479 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 GGCXP38435 758 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 CETN2P41208 172 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 FNTAP49354 379 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 TERF1P54274 439 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 ZFP36L1Q07352 338 aaKnown RBP10.13□□□□□ -0.79
ATG4B-212ENST00000430617 PDE1CQ14123 709 aaPredicted RBP10.13□□□□□ -0.79
ATG4B-212ENST00000430617 TMEM259Q4ZIN3 620 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 PRRT3Q5FWE3 981 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 TEX35Q5T0J7 233 aa10.13□□□□□ -0.79
ATG4B-212ENST00000430617 FAM46CQ5VWP2 391 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms