RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 OR4K2Q8NGD2 314 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 OR13C4Q8NGS5 318 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 GANCQ8TET4 914 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 VPS37BQ9H9H4 285 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC00887-203ENST00000429578 SLC2A6Q9UGQ3 507 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 NCKAP1Q9Y2A7 1128 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 PKP3Q9Y446 797 aa17.06■□□□□ 0.32
LINC00887-203ENST00000429578 PSMD11O00231 422 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 NEMP1O14524 444 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 ABHD2P08910 425 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 HADHAP40939 763 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 FRG1Q14331 258 aaKnown RBP17.05■□□□□ 0.32
LINC00887-203ENST00000429578 PTPRCAPQ14761 206 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 TMEM52BQ4KMG9 183 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 KIAA0930Q6ICG6 404 aaPredicted RBP17.05■□□□□ 0.32
LINC00887-203ENST00000429578 LIPIQ6XZB0 460 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 CYS1Q717R9 158 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 PGBD3Q8N328 593 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 CBARPQ8N350 705 aaPredicted RBP17.05■□□□□ 0.32
LINC00887-203ENST00000429578 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 DNAJC1Q96KC8 554 aaKnown RBP17.05■□□□□ 0.32
LINC00887-203ENST00000429578 HHIPQ96QV1 700 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 FUT8Q9BYC5 575 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 ITM2CQ9NQX7 267 aa17.05■□□□□ 0.32
LINC00887-203ENST00000429578 TCRBV9S1A1TA0A576 114 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 TSPAN6O43657 245 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 PLRG1O43660 514 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 ELFN1P0C7U0 828 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 CXCL12P48061 93 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 TPMTP51580 245 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 STC1P52823 247 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 RASSF3Q86WH2 238 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 CERS2Q96G23 380 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 CDKN2AIPNLQ96HQ2 116 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 BPIFA1Q9NP55 256 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 MOCS1Q9NZB8 636 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 USP36Q9P275 1121 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 EBF1Q9UH73 591 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 A0A087WUV0 522 aaPredicted RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 H7C0S8 307 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 RPP40O75818 363 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 VAPBO95292 243 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 APBB3O95704 486 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 C1SP09871 688 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 STX2P32856 288 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 ARCN1P48444 511 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 LIG3P49916 1009 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 CCR3P51677 355 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 ADPRHP54922 357 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 TMPRSS15P98073 1019 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 ANGPT1Q15389 498 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 TRMT10BQ6PF06 316 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 HDAC10Q969S8 669 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 TBATAQ96M53 351 aa17.04■□□□□ 0.32
LINC00887-203ENST00000429578 WRAP53Q9BUR4 548 aaKnown RBP17.04■□□□□ 0.32
LINC00887-203ENST00000429578 GFRA3O60609 400 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 IGLV3-19P01714 112 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 ARNTP27540 789 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 SPINT3P49223 89 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 ARSDP51689 593 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 PRAMEP78395 509 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 PDPK2PQ6A1A2 396 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 HSD11B1LQ7Z5J1 315 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 UNC5BQ8IZJ1 945 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 OR14C36Q8NHC7 312 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 KDM4CQ9H3R0 1056 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 CD93Q9NPY3 652 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 PKD2L2Q9NZM6 624 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
LINC00887-203ENST00000429578 CCL22O00626 93 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 PCDH8O95206 1070 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 NUDT17P0C025 328 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 BPIP17213 487 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 CASP8Q14790 479 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 ZDHHC20Q5W0Z9 365 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 ZNF449Q6P9G9 518 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 KCNMB4Q86W47 210 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 UHMK1Q8TAS1 419 aaKnown RBP17.02■□□□□ 0.32
LINC00887-203ENST00000429578 CXorf40AQ8TE69 158 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 PLEKHG4BQ96PX9 1271 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 ACSS3Q9H6R3 686 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 PREBQ9HCU5 417 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 PPANQ9NQ55 473 aaKnown RBP17.02■□□□□ 0.32
LINC00887-203ENST00000429578 C20orf96Q9NUD7 363 aaPredicted RBP17.02■□□□□ 0.32
LINC00887-203ENST00000429578 IL1RAPL1Q9NZN1 696 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 FKBPLQ9UIM3 349 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 USP34Q70CQ2 3546 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 PIEZO1Q92508 2521 aa17.02■□□□□ 0.32
LINC00887-203ENST00000429578 RGSL1A5PLK6 1076 aa17.01■□□□□ 0.31
LINC00887-203ENST00000429578 PROB1E7EW31 1015 aa17.01■□□□□ 0.31
LINC00887-203ENST00000429578 MMP20O60882 483 aa17.01■□□□□ 0.31
LINC00887-203ENST00000429578 ZNF217O75362 1048 aa17.01■□□□□ 0.31
LINC00887-203ENST00000429578 C1QAP02745 245 aa17.01■□□□□ 0.31
LINC00887-203ENST00000429578 C6P13671 934 aa17.01■□□□□ 0.31
LINC00887-203ENST00000429578 NBL1P41271 181 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms