RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RHAGQ02094 409 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 TMEM132DQ14C87 1099 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 SPCS2Q15005 226 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 ARMCX4Q5H9R4 360 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 EFL1Q7Z2Z2 1120 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 PIWIL3Q7Z3Z3 882 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 SCML4Q8N228 414 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 SHKBP1Q8TBC3 707 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 FAR1Q8WVX9 515 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 SNAPC3Q92966 411 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 MED10Q9BTT4 135 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 DHX35Q9H5Z1 703 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 IFT80Q9P2H3 777 aaPredicted RBP14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 NRCAMQ92823 1304 aa14.44□□□□□ -0.1
SYNGAP1-203ENST00000428982 E5RI56 91 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 hCG_2039718K7EN88 272 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ACKR2O00590 384 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 AVILO75366 819 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 RSL1D1O76021 490 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 WDR47O94967 919 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 VAPBO95292 243 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 IL1BP01584 269 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 BPGMP07738 259 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 NR2C2P49116 596 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 CENPAP49450 140 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 STX5Q13190 355 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 LTBP1Q14766 1721 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 SPOUT1Q5T280 376 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 PGM2L1Q6PCE3 622 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 CCBE1Q6UXH8 406 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 BNIPLQ7Z465 357 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 KCTD20Q7Z5Y7 419 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 BBS7Q8IWZ6 715 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 PCDH20Q8N6Y1 951 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 CCDC185Q8N715 623 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZBTB45Q96K62 511 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ANKRD60Q9BZ19 345 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 SYTL2Q9HCH5 934 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 PNPOQ9NVS9 261 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 EIF3LQ9Y262 564 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ANGPT2O15123 496 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 FAM189A1O60320 539 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 SRP72O76094 671 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 CD4P01730 458 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 SLC10A3P09131 477 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ALDH4A1P30038 563 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 MLLT3P42568 568 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 SLC12A1Q13621 1099 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 NOMO1Q15155 1222 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 DENND1BQ6P3S1 775 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 CCNYQ8ND76 341 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 PSD4Q8NDX1 1056 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 BCL7CQ8WUZ0 217 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 QKIQ96PU8 341 aaKnown RBP eCLIP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 C17orf62Q9BQA9 187 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 FAM124BQ9H5Z6 455 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ITM2CQ9NQX7 267 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 NCAM2O15394 837 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZNF143P52747 638 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ALFQ53S48 1182 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 DENND5AQ6IQ26 1287 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 SLC39A4Q6P5W5 647 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ARSKQ6UWY0 536 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 METTL23Q86XA0 190 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 PGAM4Q8N0Y7 254 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 UBR7Q8N806 425 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 MCUQ8NE86 351 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 OR5B17Q8NGF7 314 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 RXFP2Q8WXD0 754 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 HERVK_113Q902F9 699 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ELMO1Q92556 727 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZNF516Q92618 1163 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZNF641Q96N77 438 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 NSMCE4AQ9NXX6 385 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 STON1Q9Y6Q2 735 aa14.43□□□□□ -0.1
SYNGAP1-203ENST00000428982 IL1RL1Q01638 556 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 GRB14Q14449 540 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 SEZ6Q53EL9 994 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 KLHL12Q53G59 568 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 JADE1Q6IE81 842 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 CARM1Q86X55 608 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 SVOPQ8N4V2 548 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 DNAAF3Q8N9W5 541 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZFP90Q8TF47 636 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 APOBEC3GQ9HC16 384 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 BRD7Q9NPI1 651 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 TRMT13Q9NUP7 481 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 TRMT6Q9UJA5 497 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 CNTN6Q9UQ52 1028 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 SCO2O43819 266 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 DGCR6Q14129 220 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 CA9Q16790 459 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 TBRG1Q3YBR2 411 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 FNBP1LQ5T0N5 605 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 VWA5B1Q5TIE3 1220 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZHX1-C8orf76Q96EF9 292 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZNF597Q96LX8 424 aa14.42□□□□□ -0.1
SYNGAP1-203ENST00000428982 OSMRQ99650 979 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms