RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 RHOP08100 348 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 PEX2P28328 305 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 AVPR1AP37288 418 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 EPHB1P54762 984 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 ARF5P84085 180 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CDH18Q13634 790 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 ITGA9Q13797 1035 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TRIP10Q15642 601 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CHI3L2Q15782 390 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 SIRPB2Q5JXA9 342 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CERCAMQ5T4B2 595 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 RNF111Q6ZNA4 994 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CDHR3Q6ZTQ4 885 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CLEC14AQ86T13 490 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CRLF3Q8IUI8 442 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CELF5Q8N6W0 485 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 VN1R2Q8NFZ6 395 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 SPATA22Q8NHS9 363 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 SREK1Q8WXA9 508 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 LRIG1Q96JA1 1093 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 LYSMD1Q96S90 227 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CCDC106Q9BWC9 280 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TDRD1Q9BXT4 1180 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CEP41Q9BYV8 373 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 MUC3BQ9H195 1237 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 MAGEE1Q9HCI5 957 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 C20orf96Q9NUD7 363 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 DDX18Q9NVP1 670 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 NLE1Q9NVX2 485 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GDE1Q9NZC3 331 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 PTTG2Q9NZH5 202 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CFAP97Q9P2B7 532 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 LHX3Q9UBR4 397 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 HMX2A2RU54 273 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 LCHNA4D1U4 455 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 HIDE1A8MVS5 230 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 WASH3PC4AMC7 463 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 HTRA2O43464 458 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ATP9BO43861 1147 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CD160O95971 181 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 MT-CYBP00156 380 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 NFKBIAP25963 317 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 MAGEA8P43361 318 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ADARP55265 1226 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 GRAMD1BQ3KR37 738 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 TMEM259Q4ZIN3 620 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 LYPLAL1Q5VWZ2 237 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 RBM44Q6ZP01 1051 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 HS6ST3Q8IZP7 471 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 NDUFAF2Q8N183 169 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CCDC33Q8N5R6 958 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 PCDH20Q8N6Y1 951 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ICA1LQ8NDH6 482 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 PIP4K2CQ8TBX8 421 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 USP33Q8TEY7 942 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CCDC124Q96CT7 223 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 MYEOVQ96EZ4 313 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 C7orf26Q96N11 449 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CORO1BQ9BR76 489 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 SLC13A1Q9BZW2 595 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 C1orf21Q9H246 121 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 STN1Q9H668 368 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CHRAC1Q9NRG0 131 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 SIRPGQ9P1W8 387 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 MSRAQ9UJ68 235 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 GMEB1Q9Y692 573 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 HOXC11O43248 304 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 LDB2O43679 373 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 COQ9O75208 318 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 RPP40O75818 363 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 SERPINA6P08185 405 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 SRPRAP08240 638 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 MYL4P12829 197 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 GRK2P25098 689 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 NMBRP28336 390 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 SERPINB5P36952 375 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 DSC2Q02487 901 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 FOLH1Q04609 750 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 TBCCQ15814 346 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CRY1Q16526 586 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ISLR2Q6UXK2 745 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 B3GNT6Q6ZMB0 384 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ZC3HC1Q86WB0 502 aaKnown RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 NUDCD3Q8IVD9 361 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 CBARPQ8N350 705 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 OR7D4Q8NG98 312 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 LRRN4Q8WUT4 740 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ABTB1Q969K4 478 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF707Q96C28 371 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF641Q96N77 438 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-204ENST00000427414 EBF4Q9BQW3 602 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 C17orf80Q9BSJ5 609 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 EPB41L1Q9H4G0 881 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 SLC27A6Q9Y2P4 619 aa8.54□□□□□ -1.04
SH3D19-204ENST00000427414 ATG2AQ2TAZ0 1938 aa8.53□□□□□ -1.04
SH3D19-204ENST00000427414 C15orf38-AP3S2A0A0A6YYH1 394 aa8.53□□□□□ -1.04
SH3D19-204ENST00000427414 A0A0D9SEW6 157 aa8.53□□□□□ -1.04
SH3D19-204ENST00000427414 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
SH3D19-204ENST00000427414 TTC36A6NLP5 189 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms