RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 U3KQA8 63 aa13.62□□□□□ -0.23
SNX3-204ENST00000426155 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
SNX3-204ENST00000426155 USP24Q9UPU5 2620 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 APOC4-APOC2K7ER74 178 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 TOR1BO14657 336 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 DDX3YO15523 660 aaKnown RBP13.61□□□□□ -0.23
SNX3-204ENST00000426155 PMPCBO75439 489 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 RFPL3O75679 317 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 SOD1P00441 154 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 APOC2P02655 101 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 SLC4A1P02730 911 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 TSHRP16473 764 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 CKMT2P17540 419 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 CA4P22748 312 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 NFKBIAP25963 317 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 RBL1P28749 1068 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 KIAA1024LP59773 190 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 SRP54P61011 504 aaKnown RBP13.61□□□□□ -0.23
SNX3-204ENST00000426155 DAB2P98082 770 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 CCDC181Q5TID7 509 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 RAET1GQ6H3X3 334 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 TECPR1Q7Z6L1 1165 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 ZNF567Q8N184 647 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 ACTL9Q8TC94 416 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 HTR3CQ8WXA8 447 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 TADA1Q96BN2 335 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 CALR3Q96L12 384 aaKnown RBP13.61□□□□□ -0.23
SNX3-204ENST00000426155 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 WDR92Q96MX6 357 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 SLC13A1Q9BZW2 595 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 SLC25A51Q9H1U9 297 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 ABCG8Q9H221 673 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 KLHL8Q9P2G9 620 aaPredicted RBP13.61□□□□□ -0.23
SNX3-204ENST00000426155 NEUROG3Q9Y4Z2 214 aa13.61□□□□□ -0.23
SNX3-204ENST00000426155 C1orf232A0A0U1RR37 186 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 H7C0C1 242 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 PSMD11O00231 422 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 CACNB4O00305 520 aaPredicted RBP13.6□□□□□ -0.23
SNX3-204ENST00000426155 HTR1BP28222 390 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 PTPN7P35236 360 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 TRIM23P36406 574 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 ATP5OP48047 213 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 HK3P52790 923 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 STC1P52823 247 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 COPS2P61201 443 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 CCZ1BP86790 482 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 CCZ1P86791 482 aaPredicted RBP13.6□□□□□ -0.23
SNX3-204ENST00000426155 CDKN3Q16667 212 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 BZW1Q7L1Q6 419 aaKnown RBP13.6□□□□□ -0.23
SNX3-204ENST00000426155 LYSMD3Q7Z3D4 306 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 TRIM74Q86UV6 250 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 NDUFAF2Q8N183 169 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 BTN2A2Q8WVV5 523 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 GATA6Q92908 595 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 EID2BQ96D98 161 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 GORASP1Q9BQQ3 440 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 SPASTQ9UBP0 616 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 MOSPD1Q9UJG1 213 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 GUCA1BQ9UMX6 200 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 ASXL3Q9C0F0 2248 aa13.6□□□□□ -0.23
SNX3-204ENST00000426155 RP1P56715 2156 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 ARHGEF17Q96PE2 2063 aaPredicted RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 TCRBV7S2A1N4TA0A589 114 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 NEMP2A6NFY4 417 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 ANKRD66B4E2M5 251 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 CASC3O15234 703 aaKnown RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 ARHGAP6O43182 974 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 RASGRP1O95267 797 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 ALPPL2P10696 532 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 MYCLP1P12525 358 aaPredicted RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 ZNF30P17039 623 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 ACP1P24666 158 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 POLD2P49005 469 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 RPL26P61254 145 aaKnown RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 CDK3Q00526 305 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 CDK18Q07002 472 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 DOK6Q6PKX4 331 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 UNQ6494/PRO21346Q6UXR6 183 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 TMPRSS7Q7RTY8 843 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 SFTPA2Q8IWL1 248 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 LRRC8AQ8IWT6 810 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 SYCE1Q8N0S2 351 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 OR56A4Q8NGH8 313 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 CCL4L1Q8NHW4 92 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 AP2M1Q96CW1 435 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 OXNAD1Q96HP4 312 aaPredicted RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 WDR24Q96S15 920 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 LYSMD1Q96S90 227 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 MLPHQ9BV36 600 aaPredicted RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 RPL26L1Q9UNX3 145 aaKnown RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 SHOC2Q9UQ13 582 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 MSRB2Q9Y3D2 182 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 SPO11Q9Y5K1 396 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 EPG5Q9HCE0 2579 aa13.59□□□□□ -0.23
SNX3-204ENST00000426155 ZNF106Q9H2Y7 1883 aaKnown RBP13.59□□□□□ -0.23
SNX3-204ENST00000426155 BPTFQ12830 3046 aa13.58□□□□□ -0.23
SNX3-204ENST00000426155 PRSS38A1L453 326 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms