RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 CCR10P46092 362 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 BLKP51451 505 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 DUSP3P51452 185 aaPredicted RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 PPARDQ03181 441 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 TRAF2Q12933 501 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 RALGDSQ12967 914 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 MTM1Q13496 603 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 INPP5AQ14642 412 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 ACOX1Q15067 660 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 DEFB133Q30KQ1 61 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 PRRT3Q5FWE3 981 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 RALGPS1Q5JS13 557 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 ARMC12Q5T9G4 340 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 ENPP7Q6UWV6 458 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 LIPIQ6XZB0 460 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 CCNYQ8ND76 341 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 ATL2Q8NHH9 583 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 FAF2Q96CS3 445 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 PRR11Q96HE9 360 aaPredicted RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 NSMCE3Q96MG7 304 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 IL12RB2Q99665 862 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 APOOQ9BUR5 198 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 TCEAL2Q9H3H9 227 aaPredicted RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 KLF15Q9UIH9 416 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 INTUQ9ULD6 942 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 SRPK3Q9UPE1 567 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
SGCE-203ENST00000425444 SPENQ96T58 3664 aaKnown RBP12.74□□□□□ -0.37
SGCE-203ENST00000425444 ANKRD36A6QL64 1941 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 CLEC18AA5D8T8 446 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 CACNB4O00305 520 aaPredicted RBP12.73□□□□□ -0.37
SGCE-203ENST00000425444 MATN3O15232 486 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 HTRA2O43464 458 aaPredicted RBP12.73□□□□□ -0.37
SGCE-203ENST00000425444 MTA2O94776 668 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 CYP2A6P11509 494 aaPredicted RBP12.73□□□□□ -0.37
SGCE-203ENST00000425444 CTSEP14091 401 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 VIPR1P32241 457 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 MAGEA1P43355 309 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 NOP2P46087 812 aaKnown RBP12.73□□□□□ -0.37
SGCE-203ENST00000425444 PEX5P50542 639 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 GBE1Q04446 702 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 C1orf61Q13536 156 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 ARHGEF7Q14155 803 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 NFATC4Q14934 902 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 IGFBP7Q16270 282 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 ZCCHC8Q6NZY4 707 aaKnown RBP12.73□□□□□ -0.37
SGCE-203ENST00000425444 CLEC18BQ6UXF7 455 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 USP45Q70EL2 814 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 RD3Q7Z3Z2 195 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 CLEC14AQ86T13 490 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 HID1Q8IV36 788 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 NDUFAF2Q8N183 169 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 PQLC3Q8N755 202 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 TC2NQ8N9U0 490 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 CLEC18CQ8NCF0 446 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 IFI44Q8TCB0 444 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 APOLD1Q96LR9 279 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 LRRC61Q9BV99 259 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 LRRC4CQ9HCJ2 640 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 RBM22Q9NW64 420 aaKnown RBP eCLIP12.73□□□□□ -0.37
SGCE-203ENST00000425444 KLQ9UEF7 1012 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
SGCE-203ENST00000425444 ZFHX3Q15911 3703 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 APOL1O14791 398 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 KRT38O76015 456 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 RASGRP1O95267 797 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 PGLSO95336 258 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 ANXA6P08133 673 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 GIMD1P0DJR0 217 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 CCNB1P14635 433 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 TGM2P21980 687 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 CA4P22748 312 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 CCNCP24863 283 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
SGCE-203ENST00000425444 SLC1A1P43005 524 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 EPHB1P54762 984 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 FOXK1P85037 733 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 AGERQ15109 404 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 TCEA2Q15560 299 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 CNGA3Q16281 694 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 ALG11Q2TAA5 492 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 PTRH1Q86Y79 214 aaKnown RBP12.72□□□□□ -0.37
SGCE-203ENST00000425444 RFX6Q8HWS3 928 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 CCDC13Q8IYE1 715 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 PLA2G15Q8NCC3 412 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 WDR36Q8NI36 951 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms