RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NPPAP01160 153 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 URODP06132 367 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ABHD2P08910 425 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 THRBP10828 461 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 IL2RBP14784 551 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 GYPEP15421 78 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CTPS1P17812 591 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 AGAP20933 346 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 NR4A1P22736 598 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ALDH4A1P30038 563 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SFNP31947 248 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 GUCY1A2P33402 732 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CRHR1P34998 444 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CTNNB1P35222 781 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 VIPR2P41587 438 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 EFNB1P98172 346 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PMP22Q01453 160 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SPIBQ01892 262 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ABRQ12979 859 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 DOC2AQ14183 400 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 KCNAB1Q14722 419 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ARHGEF6Q15052 776 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ZRSR1Q15695 479 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF750Q32MQ0 723 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CFAP221Q4G0U5 840 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 HERC4Q5GLZ8 1057 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CACHD1Q5VU97 1274 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 METTL11BQ5VVY1 283 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ARHGAP17Q68EM7 881 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 LAIR1Q6GTX8 287 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 JADE1Q6IE81 842 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PAPD4Q6PIY7 484 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC80Q76M96 950 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TAS1R1Q7RTX1 841 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CAMKMTQ7Z624 323 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 MTERF4Q7Z6M4 381 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SYVN1Q86TM6 617 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 VASH2Q86V25 355 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 EXOC3L1Q86VI1 746 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PLXDC1Q8IUK5 500 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 DNAJC10Q8IXB1 793 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 DDIASQ8IXT1 998 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TIGD4Q8IY51 512 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CFAP206Q8IYR0 622 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 MMP21Q8N119 569 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 AGBL3Q8NEM8 1001 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 REPS2Q8NFH8 660 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CADM4Q8NFZ8 388 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 GRAPLQ8TC17 118 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 GANCQ8TET4 914 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 NSMCE1Q8WV22 266 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 METTL21AQ8WXB1 218 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 BCL2L2Q92843 193 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PTERQ96BW5 349 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ZG16BQ96DA0 208 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 MRPL38Q96DV4 380 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ARSGQ96EG1 525 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 C14orf79Q96F83 325 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 C5orf30Q96GV9 206 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 REXO5Q96IC2 774 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TPD52L3Q96J77 140 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SAMD8Q96LT4 415 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 KLHL15Q96M94 604 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 GDAP1L1Q96MZ0 367 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 GAD1Q99259 594 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PAFAH2Q99487 392 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PARK7Q99497 189 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 BCL7BQ9BQE9 202 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SPATA5L1Q9BVQ7 753 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TPPP3Q9BW30 176 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF350Q9GZX5 532 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 LSG1Q9H089 658 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 IQCGQ9H095 443 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 KCNH6Q9H252 994 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC134Q9H6E4 229 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PPANQ9NQ55 473 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ARL8BQ9NVJ2 186 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 FAM118AQ9NWS6 357 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 RAB20Q9NX57 234 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 VPS18Q9P253 973 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 MAD2L2Q9UI95 211 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CD207Q9UJ71 328 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 FZD1Q9UP38 647 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SSX2IPQ9Y2D8 614 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ZBTB1Q9Y2K1 713 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 STRAPQ9Y3F4 350 aaKnown RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SLC4A4Q9Y6R1 1079 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 LOC102723996A0A087X1L8 192 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 A0A1W2PQF6 199 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 A0A1W2PRG0 241 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 FAM47DPA6NHR8 397 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ARHGAP42A6NI28 874 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 M0QYG6 137 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 POLRMTO00411 1230 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 WNT10BO00744 389 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 LDLRAD4O15165 306 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ADAMDEC1O15204 470 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 EIF3DO15371 548 aaKnown RBP eCLIP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PAPSS1O43252 624 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 HS6ST1O60243 411 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms