RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 FAM83EQ2M2I3 478 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 MAP7D1Q3KQU3 841 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 NANOGP8Q6NSW7 305 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 C8orf82Q6P1X6 216 aaPredicted RBP14.35□□□□□ -0.11
MSH5-206ENST00000423982 AGMOQ6ZNB7 445 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 CLEC20AQ6ZU45 233 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 TBC1D15Q8TC07 691 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 HASPINQ8TF76 798 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 TOP1MTQ969P6 601 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 VPS45Q9NRW7 570 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 MIOSQ9NXC5 875 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 DSEQ9UL01 958 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 TSC2P49815 1807 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 EI24O14681 340 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 LRIG2O94898 1065 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 CD4P01730 458 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 UGT1A1P22309 533 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 UGT1A4P22310 534 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 UGT1A3P35503 534 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 UGT1A5P35504 534 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 HADHAP40939 763 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 GJA8P48165 433 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 CD97P48960 835 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 TECRLQ5HYJ1 363 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 KIAA0319Q5VV43 1072 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 NAPEPLDQ6IQ20 393 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 DENND5AQ6IQ26 1287 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 RTN4RL1Q86UN2 441 aaPredicted RBP14.35□□□□□ -0.11
MSH5-206ENST00000423982 APPL2Q8NEU8 664 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 GFM2Q969S9 779 aaKnown RBP14.35□□□□□ -0.11
MSH5-206ENST00000423982 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 DUSP16Q9BY84 665 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
MSH5-206ENST00000423982 DHRS12A0PJE2 317 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 ARL5CA6NH57 179 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 LRRC14BA6NHZ5 514 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 COQ9O75208 318 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 IPO13O94829 963 aaKnown RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 ZBTB11O95625 1053 aaPredicted RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 FUCA1P04066 466 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 USP17L7P0C7H9 530 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 CPB1P15086 417 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 NCK1P16333 377 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 ZNF182P17025 639 aaPredicted RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 CES1P23141 567 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 MYF6P23409 242 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 POLR2IP36954 125 aaKnown RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 GALNT2Q10471 571 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 GPNMBQ14956 572 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 LRRC26Q2I0M4 334 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 TCTN1Q2MV58 587 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 KIF19Q2TAC6 998 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 CROCCP3Q8IVE0 287 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 LRRC43Q8N309 656 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 LRRC52Q8N7C0 313 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 LINC01599Q8WXQ3 324 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 ARMC5Q96C12 935 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 DUS3LQ96G46 650 aaKnown RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 SLC25A23Q9BV35 468 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 PLEKHA5Q9HAU0 1116 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 OR12D3Q9UGF7 316 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 TRAF6Q9Y4K3 522 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 CORINQ9Y5Q5 1042 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 ERI2A8K979 691 aaKnown RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 SUPT7LO94864 414 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 NPR3P17342 541 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 CAPN3P20807 821 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 BDNFP23560 247 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 SLC12A2P55011 1212 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 CD300CQ08708 224 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 BFSP2Q13515 415 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 KYAT1Q16773 422 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 PCID2Q5JVF3 399 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 TBL1YQ9BQ87 522 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 MED10Q9BTT4 135 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
MSH5-206ENST00000423982 SELENONQ9NZV5 590 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 USP22Q9UPT9 525 aa14.34□□□□□ -0.11
MSH5-206ENST00000423982 A0A0J9YYE9 177 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 EN2P19622 333 aaPredicted RBP14.33□□□□□ -0.12
MSH5-206ENST00000423982 MAPRE2Q15555 327 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 SLC36A3Q495N2 470 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 FBXO48Q5FWF7 155 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 FAM45BPQ6NSW5 357 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 RWDD4Q6NW29 188 aaKnown RBP14.33□□□□□ -0.12
MSH5-206ENST00000423982 ALKAL1Q6UXT8 129 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 KCTD8Q6ZWB6 473 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 LARP4Q71RC2 724 aaKnown RBP eCLIP14.33□□□□□ -0.12
MSH5-206ENST00000423982 SLC15A3Q8IY34 581 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 FAM45AQ8TCE6 357 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 DPF3Q92784 378 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 PLEKHA8Q96JA3 519 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 SLC2A13Q96QE2 648 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 RHOBTB2Q9BYZ6 727 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 MCOLN1Q9GZU1 580 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 GSTO2Q9H4Y5 243 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 PIF1Q9H611 641 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms