RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-233	ENST00000421124	PKD2L2	Q9NZM6	624 aa		18.57	■□□□□ 0.56
DDR1-233	ENST00000421124	SHOC2	Q9UQ13	582 aa		18.57	■□□□□ 0.56
DDR1-233	ENST00000421124	SPTY2D1-AS1	A0A0U1RR47	76 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124		A0A1B0GTQ1	180 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	PSMD3	O43242	534 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	ETS1	P14921	441 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	TSHR	P16473	764 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	FDFT1	P37268	417 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	ARRB1	P49407	418 aa	Predicted RBP	18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	CCT8	P50990	548 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	DPT	Q07507	201 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	SLC14A1	Q13336	389 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	PTK2B	Q14289	1009 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	PRAMEF14	Q5SWL7	426 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	KCTD11	Q693B1	232 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	PNCK	Q6P2M8	343 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	RFLNA	Q6ZTI6	216 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	TMC3	Q7Z5M5	1100 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	NRSN1	Q8IZ57	195 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	TAB3	Q8N5C8	712 aa	Predicted RBP	18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	MAGOHB	Q96A72	148 aa	Known RBP	18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	TBL1Y	Q9BQ87	522 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	APOL2	Q9BQE5	337 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	APOO	Q9BUR5	198 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	ABCG8	Q9H221	673 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	TRABD	Q9H4I3	376 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	HACD3	Q9P035	362 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	PAK5	Q9P286	719 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	CD84	Q9UIB8	345 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	SPO11	Q9Y5K1	396 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	SAR1B	Q9Y6B6	198 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	LRP4	O75096	1905 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	MYLK	Q15746	1914 aa		18.56	■□□□□ 0.56
DDR1-233	ENST00000421124	GOLGA6L10	A0A0M3HER8	536 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	YKT6	O15498	198 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	TRIM23	P36406	574 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	RXRG	P48443	463 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	SPINT3	P49223	89 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	OLIG2	Q13516	323 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	FZD2	Q14332	565 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	CYP1B1	Q16678	543 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	TPRG1L	Q5T0D9	272 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	C4orf22	Q6V702	233 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	MACC1	Q6ZN28	852 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	PRUNE1	Q86TP1	453 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	GLIS1	Q8NBF1	620 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	ATL2	Q8NHH9	583 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	AP2M1	Q96CW1	435 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	RTKN	Q9BST9	563 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	LRRC40	Q9H9A6	602 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	OR1A2	Q9Y585	309 aa		18.55	■□□□□ 0.56
DDR1-233	ENST00000421124	RGSL1	A5PLK6	1076 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124		K7ESM1	405 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	FANCG	O15287	622 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	USP12	O75317	370 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	AP2A1	O95782	977 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	SLC4A1	P02730	911 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	ZSCAN5DP	P0CG00	497 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	RPL22	P35268	128 aa	Known RBP	18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	ETF1	P62495	437 aa	Known RBP	18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	IL9R	Q01113	521 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	SPARCL1	Q14515	664 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	NFATC4	Q14934	902 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	SHB	Q15464	509 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	HS1BP3	Q53T59	392 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	RAET1G	Q6H3X3	334 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	TTC27	Q6P3X3	843 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	NLRP8	Q86W28	1048 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	PARG	Q86W56	976 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	PELI3	Q8N2H9	469 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	PDCD7	Q8N8D1	485 aa	Known RBP	18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	BLOC1S5	Q8TDH9	187 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	SCAMP4	Q969E2	229 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	EID2B	Q96D98	161 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	TRIM44	Q96DX7	344 aa	Predicted RBP	18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	WDR26	Q9H7D7	661 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	ETNK1	Q9HBU6	452 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	ARNT2	Q9HBZ2	717 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	RAB6B	Q9NRW1	208 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	DLL3	Q9NYJ7	618 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	PCDHGB2	Q9Y5G2	931 aa		18.54	■□□□□ 0.56
DDR1-233	ENST00000421124	ERI2	A8K979	691 aa	Known RBP	18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	CACNB4	O00305	520 aa	Predicted RBP	18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	AURKA	O14965	403 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	PCDHGA12	O60330	932 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	PHF2	O75151	1096 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	PYGL	P06737	847 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	HOXC4	P09017	264 aa	Predicted RBP	18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	CD59	P13987	128 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	HTR1B	P28222	390 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	TEAD1	P28347	426 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	EPHA8	P29322	1005 aa	Predicted RBP	18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	COIL	P38432	576 aa	Predicted RBP	18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	GPR1	P46091	355 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	KIAA1024L	P59773	190 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	SEMA5A	Q13591	1074 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	SUZ12	Q15022	739 aa	Known RBP	18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	DENND5A	Q6IQ26	1287 aa		18.53	■□□□□ 0.56
DDR1-233	ENST00000421124	GLT6D1	Q7Z4J2	308 aa		18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms