RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RTN3O95197 1032 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 CD4P01730 458 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 HLA-DOBP13765 273 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 CCR9P51686 369 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 HNRNPH2P55795 449 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 DLX5P56178 289 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 NLRP5P59047 1200 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 DRAP1Q14919 205 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 CTF1Q16619 201 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF718Q3SXZ3 478 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 HSP90AB4PQ58FF6 505 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 KBTBD3Q8NAB2 608 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 RFFLQ8WZ73 363 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 IGSF8Q969P0 613 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 INTS12Q96CB8 462 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 MMABQ96EY8 250 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 WDFY2Q96P53 400 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF385AQ96PM9 386 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 STRA6Q9BX79 667 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 RANBP17Q9H2T7 1088 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 POLR1BQ9H9Y6 1135 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 CNOT8Q9UFF9 292 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 KCNG2Q9UJ96 466 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 HAO1Q9UJM8 370 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 PADI3Q9ULW8 664 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 ERVK-11Q9UQG0 969 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 UTYO14607 1347 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 PDS5AQ29RF7 1337 aaKnown RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 FAM237AA0A1B0GTK4 181 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 NKX2-2O95096 273 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 ARL1P40616 181 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 F2RL1P55085 397 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 POU5F1BQ06416 359 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 TNFAIP1Q13829 316 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 FRG1Q14331 258 aaKnown RBP4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 USP41Q3LFD5 358 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 CDONQ4KMG0 1287 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 TSSK4Q6SA08 328 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 CYP20A1Q6UW02 462 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 CERS3Q8IU89 383 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 DIS3L2Q8IYB7 885 aaKnown RBP4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 BEST3Q8N1M1 668 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 SLC20A1Q8WUM9 679 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 TMEM19Q96HH6 336 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 DUX5Q96PT3 197 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 CMKLR1Q99788 373 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 EBF2Q9HAK2 575 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 DONSONQ9NYP3 566 aa4.42□□□□□ -1.7
HMGB1P49-201ENST00000418882 IGHV4OR15-8A0A075B7B6 117 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 A0A0G2JPF8 293 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 B4E171 279 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 HNRNPCL3B7ZW38 293 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 CLGNO14967 610 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 HNRNPCL1O60812 293 aaKnown RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 CLEC3BP05452 202 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 HNRNPCL4P0DMR1 293 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 ITGA2P17301 1181 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 S1PR1P21453 382 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 BDKRB2P30411 391 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 ELF1P32519 619 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 TSPAN7P41732 249 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 CLCN3P51790 818 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 FUT6P51993 359 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 OLR1P78380 273 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 RELQ04864 619 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 TBX2Q13207 712 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF672Q499Z4 452 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 C6orf141Q5SZD1 244 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 RGMBQ6NW40 437 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 METTL2BQ6P1Q9 378 aaKnown RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 GFRALQ6UXV0 394 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 CCNI2Q6ZMN8 369 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 DPPA4Q7L190 304 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 SMIM29Q86T20 159 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 TMEM219Q86XT9 240 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 NRROSQ86YC3 692 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 PCDH20Q8N6Y1 951 aaKnown RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 TMEM116Q8NCL8 245 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 OR14L1PQ8NHC6 308 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 BBS10Q8TAM1 723 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 NEK9Q8TD19 979 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 FIG4Q92562 907 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 METTL2AQ96IZ6 378 aaKnown RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 ACOX2Q99424 681 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 TMEM47Q9BQJ4 181 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 IFIH1Q9BYX4 1025 aaKnown RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 PRKRIP1Q9H875 184 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 SLC28A3Q9HAS3 691 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 ADAM18Q9Y3Q7 739 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 PIAS3Q9Y6X2 628 aa4.41□□□□□ -1.7
HMGB1P49-201ENST00000418882 DENND3A2RUS2 1198 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 BUB3O43684 328 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 SEC14L2O76054 403 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 MLYCDO95822 493 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 EGFP01133 1207 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 CORO1AP31146 461 aaKnown RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 RARSP54136 660 aaKnown RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 ECT2LQ008S8 904 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms