RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 AKAP3O75969 853 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 SERPINE1P05121 402 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 FAM131AQ6UXB0 335 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 CIR1Q86X95 450 aaPredicted RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 C11orf65Q8NCR3 313 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 SPATA5L1Q9BVQ7 753 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 NEO1Q92859 1461 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 CCNDBP1O95273 360 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 TFEBP19484 476 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 VPS72Q15906 364 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 INTS11Q5TA45 600 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 UNC5AQ6ZN44 842 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 CHST9Q7L1S5 443 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 TNS4Q8IZW8 715 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 S100ZQ8WXG8 99 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 C1GALT1C1Q96EU7 318 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 NRCAMQ92823 1304 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 UGT2B4P06133 528 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 ZNF8P17098 575 aaPredicted RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 NFATC2Q13469 925 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 TEAD4Q15561 434 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 UBAP2Q5T6F2 1119 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 HCAR2Q8TDS4 363 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 BRF2Q9HAW0 419 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 COPS7AQ9UBW8 275 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 MRTO4Q9UKD2 239 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 IRAK3Q9Y616 596 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 LOC100509620A0A075B734 347 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 UGT2B17O75795 530 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 UBAP2LQ14157 1087 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 FRG1Q14331 258 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 XRRA1Q6P2D8 792 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 YARS2Q9Y2Z4 477 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 EME2A4GXA9 379 aaPredicted RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 MSL3P1P0C860 447 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 SPIN3Q5JUX0 258 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 MLIPQ5VWP3 458 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 BOLLQ8N9W6 283 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 OR2L8Q8NGY9 312 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 CD99L2Q8TCZ2 262 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 MNTQ99583 582 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 EBPLQ9BY08 206 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 STARD13Q9Y3M8 1113 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 ULK1O75385 1050 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 ABRAQ8N0Z2 381 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 LIX1Q8N485 282 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 SLC43A3Q8NBI5 491 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 CPSF1Q10570 1443 aaKnown RBP18.47■□□□□ 0.55
SHANK3-202ENST00000414786 TULP3O75386 442 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 UQCRC1P31930 480 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 CXCR3P49682 368 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 PER3P56645 1201 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 NAE1Q13564 534 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
SHANK3-202ENST00000414786 NEPROQ6NW34 567 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 TTI2Q6NXR4 508 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 HERVK_113Q902F9 699 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 MROH7Q68CQ1 1323 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 CHKAP35790 457 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 SLC26A3P40879 764 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 MCOLN2Q8IZK6 566 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 UBE2E3Q969T4 207 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 ZYG11BQ9C0D3 744 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 MRPS33Q9Y291 106 aaKnown RBP18.47■□□□□ 0.55
SHANK3-202ENST00000414786 OR1F1O43749 312 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 ME2P23368 584 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 RXRGP48443 463 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 MSANTD2Q6P1R3 559 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 ZNF720Q7Z2F6 126 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 STK40Q8N2I9 435 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 SYNPOQ8N3V7 929 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 EVLQ9UI08 416 aaPredicted RBP18.47■□□□□ 0.55
SHANK3-202ENST00000414786 IFT52Q9Y366 437 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 BNIP2Q12982 314 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 BHLHB9Q6PI77 547 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 AMIGO2Q86SJ2 522 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 C8orf48Q96LL4 319 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 ZNF226Q9NYT6 803 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 MORF4L1Q9UBU8 362 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 ST3GAL5Q9UNP4 418 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 TMEM5Q9Y2B1 443 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 OAZ2O95190 189 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 GJA8P48165 433 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 MECP2P51608 486 aaKnown RBP18.47■□□□□ 0.55
SHANK3-202ENST00000414786 GPR65Q8IYL9 337 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 TMEM216Q9P0N5 145 aa18.47■□□□□ 0.55
SHANK3-202ENST00000414786 PAPSS1O43252 624 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 AP2A2O94973 939 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ANPEPP15144 967 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 MXD1Q05195 221 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 RFWD3Q6PCD5 774 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 TMC3Q7Z5M5 1100 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 HEPHQ9BQS7 1158 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 FAM227AF5H4B4 570 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 HAT1O14929 419 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 IFNGP01579 166 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 LTA4HP09960 611 aaKnown RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 POU2F1P14859 743 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 PTNP21246 168 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 GNPDA1P46926 289 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms