RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 DNAJC15Q9Y5T4 150 aa13.82□□□□□ -0.2
NUB1-201ENST00000413040 MYLKQ15746 1914 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 C7orf72A4D263 438 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 DENRO43583 198 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 CDK14O94921 469 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SMIM18P0DKX4 95 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 HSPA8P11142 646 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 CES1P23141 567 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 HTR7P34969 479 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 KCNQ1P51787 676 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 BIRC2Q13490 618 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 MAP7Q14244 749 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 ZNF549Q6P9A3 640 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 TMEM102Q8N9M5 508 aaPredicted RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 ARRDC2Q8TBH0 407 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 TWIST2Q8WVJ9 160 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 PBXIP1Q96AQ6 731 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 RNF112Q9ULX5 631 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SERPINF2P08697 491 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 DNAJB1P25685 340 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 RHDQ02161 417 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 CRHR2Q13324 411 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 GRM2Q14416 872 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 OR4D1Q15615 310 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SAMD4BQ5PRF9 694 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 MSANTD2Q6P1R3 559 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 PAQR3Q6TCH7 311 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 CCDC117Q8IWD4 279 aaPredicted RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 KLHDC8BQ8IXV7 354 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 DNAJB14Q8TBM8 379 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 RNF217Q8TC41 542 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 MRPL40Q9NQ50 206 aaKnown RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 CATSPERZQ9NTU4 200 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SCML2Q9UQR0 700 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 H3BMM5 538 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 AZIN1O14977 448 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 TYMPP19971 482 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 HERVK_113P63132 956 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 PLIN5Q00G26 463 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 PLOD1Q02809 727 aaPredicted RBP13.81□□□□□ -0.2
NUB1-201ENST00000413040 BEND5Q7L4P6 421 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 RETREG3Q86VR2 466 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SPPL2CQ8IUH8 684 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SCML4Q8N228 414 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 OR4L1Q8NH43 312 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 ZFAND2BQ8WV99 257 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 SLC39A13Q96H72 371 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 ZFYVE28Q9HCC9 887 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 CROCCQ5TZA2 2017 aa13.81□□□□□ -0.2
NUB1-201ENST00000413040 MIA3Q5JRA6 1907 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 NDUFS3O75489 264 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 ATXN1LP0C7T5 689 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 SPATA31D3P0C874 917 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 CD1DP15813 335 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 EEF1DP29692 281 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 AFMIDQ63HM1 303 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 SPATA31D4Q6ZUB0 917 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 CHSY3Q70JA7 882 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 LARP4Q71RC2 724 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUB1-201ENST00000413040 FUNDC1Q8IVP5 155 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 HIC2Q96JB3 615 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 C1orf74Q96LT6 269 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 HBEGFQ99075 208 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 CCT7Q99832 543 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 BPIFA1Q9NP55 256 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 SUCOQ9UBS9 1254 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 RNF103-CHMP3A0A140T963 221 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 A0A1B0GTL3 188 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 SMIM31A0A1B0GVY4 71 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 GIPC1O14908 333 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 ELNP15502 786 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 TSNQ15631 228 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 ARMC3Q5W041 872 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 CYHR1Q6ZMK1 362 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 FBXO39Q8N4B4 442 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 UROC1Q96N76 676 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 PRDM5Q9NQX1 630 aaPredicted RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 COMMD3-BMI1R4GMX3 469 aa13.8□□□□□ -0.2
NUB1-201ENST00000413040 NYNRINQ9P2P1 1898 aaKnown RBP13.8□□□□□ -0.2
NUB1-201ENST00000413040 PDLIM1O00151 329 aa13.79□□□□□ -0.2
NUB1-201ENST00000413040 ENPP3O14638 875 aa13.79□□□□□ -0.2
NUB1-201ENST00000413040 TLR5O60602 858 aa13.79□□□□□ -0.2
NUB1-201ENST00000413040 MT-ND1P03886 318 aa13.79□□□□□ -0.2
NUB1-201ENST00000413040 ZNF37AP17032 561 aaPredicted RBP13.79□□□□□ -0.2
NUB1-201ENST00000413040 RPL10P27635 214 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms