RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TTC7AQ9ULT0 858 aaPredicted RBP5.42□□□□□ -1.54
LINC00342-201ENST00000412393 CNTN6Q9UQ52 1028 aa5.42□□□□□ -1.54
LINC00342-201ENST00000412393 SLC27A6Q9Y2P4 619 aa5.42□□□□□ -1.54
LINC00342-201ENST00000412393 PCDHA13Q9Y5I0 950 aa5.42□□□□□ -1.54
LINC00342-201ENST00000412393 NYNRINQ9P2P1 1898 aaKnown RBP5.42□□□□□ -1.54
LINC00342-201ENST00000412393 DCHS1Q96JQ0 3298 aa5.42□□□□□ -1.54
LINC00342-201ENST00000412393 TP53BP1Q12888 1972 aaPredicted RBP5.42□□□□□ -1.54
LINC00342-201ENST00000412393 PCNX2A6NKB5 2137 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 A0A087X1B8 175 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 A0A1W2PQF6 199 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 GTPBP10A4D1E9 387 aaKnown RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 WASH3PC4AMC7 463 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ANKRD65E5RJM6 399 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 CCDC188H7C350 402 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 MYO1FO00160 1098 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 THAP12O43422 761 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 MED7O43513 233 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 SRGAP2O75044 1071 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 FBXO21O94952 628 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 LATS1O95835 1130 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 LTFP02788 710 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 GABRG2P18507 467 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 SLC9A1P19634 815 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 GPD2P43304 727 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ACADSBP45954 432 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 LIMK1P53667 647 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 TBX4P57082 545 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 E2F5Q15329 346 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 MAN2A1Q16706 1144 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ARHGAP44Q17R89 818 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 EXOC3L4Q17RC7 722 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 GEN1Q17RS7 908 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 NRN1LQ496H8 165 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 MPPE1Q53F39 396 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ANKRD20A8PQ5CZ79 823 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ERMARDQ5T6L9 678 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 STPG1Q5TH74 334 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 KLHDC7AQ5VTJ3 777 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 IL31Q6EBC2 164 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 KIAA1211LQ6NV74 962 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 DENND1BQ6P3S1 775 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 GJB7Q6PEY0 223 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 SLC36A4Q6YBV0 504 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 LPCAT2Q7L5N7 544 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ENOSF1Q7L5Y1 443 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 UNC45BQ8IWX7 931 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 FAM217AQ8IXS0 508 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 FRMD1Q8N878 549 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ACTRT1Q8TDG2 376 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 CLEC4CQ8WTT0 213 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 DDI1Q8WTU0 396 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 UCMAQ8WVF2 138 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF606Q8WXB4 792 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ZCCHC14Q8WYQ9 949 aaKnown RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 PIGKQ92643 395 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 FAM149B1Q96BN6 582 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 TLCD1Q96CP7 247 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ERLEC1Q96DZ1 483 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 TMA16Q96EY4 203 aaKnown RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 PGM2Q96G03 612 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 P2RY11Q96G91 374 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 PIWIL1Q96J94 861 aaKnown RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 PBKQ96KB5 322 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 FAM81BQ96LP2 452 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 ADOQ96SZ5 270 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 RUFY1Q96T51 708 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 TUBGCP2Q9BSJ2 902 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 SPON2Q9BUD6 331 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 SLC2A11Q9BYW1 496 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 TXLNGYQ9BZA5 131 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 FAM129AQ9BZQ8 928 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 RXFP3Q9NSD7 469 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 DTLQ9NZJ0 730 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 CTNNAL1Q9UBT7 734 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 APEX2Q9UBZ4 518 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 CORO1CQ9ULV4 474 aaPredicted RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 CLEC4EQ9ULY5 219 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 SIK3Q9Y2K2 1263 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 RAD54BQ9Y620 910 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 STON1Q9Y6Q2 735 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 MUC22E2RYF6 1773 aaPredicted RBP5.41□□□□□ -1.54
LINC00342-201ENST00000412393 CACNA1AO00555 2505 aa5.41□□□□□ -1.54
LINC00342-201ENST00000412393 DOCK4Q8N1I0 1966 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 CACNA1EQ15878 2313 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 CCT8L1PA6NM43 557 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 PES1O00541 588 aaKnown RBP5.4□□□□□ -1.54
LINC00342-201ENST00000412393 NPC1O15118 1278 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF185O15231 689 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 ACSL4O60488 711 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF217O75362 1048 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 IGLV3-27P01718 113 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 NUDT17P0C025 328 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 MYZAPP0CAP1 466 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 DRD4P21917 467 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 PON1P27169 355 aa5.4□□□□□ -1.54
LINC00342-201ENST00000412393 HOXD9P28356 352 aaPredicted RBP5.4□□□□□ -1.54
LINC00342-201ENST00000412393 RPL34P49207 117 aaKnown RBP5.4□□□□□ -1.54
LINC00342-201ENST00000412393 SLC11A2P49281 568 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms