RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LRP8Q14114 963 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 MED22Q15528 200 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 CELF3Q5SZQ8 465 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 EXOC3L1Q86VI1 746 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 STAG3L4Q8TBR4 150 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SHC3Q92529 594 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 KAT2AQ92830 837 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 C9orf16Q9BUW7 83 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 TMCO1Q9UM00 188 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SAMD4AQ9UPU9 718 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SERPINB7O75635 380 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PTPN9P43378 593 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 VLDLRP98155 873 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ZDHHC20Q5W0Z9 365 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 KIAA0319LQ8IZA0 1049 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 MC4RP32245 332 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 RPL3P39023 403 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 MNDAP41218 407 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 TRIM40Q6P9F5 258 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF615Q8N8J6 731 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 OVCA2Q8WZ82 227 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PPCDCQ96CD2 204 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 CST11Q9H112 138 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 EHD4Q9H223 541 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 C3orf14Q9HBI5 128 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 THAP1Q9NVV9 213 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 FBXW2Q9UKT8 454 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 MTF2Q9Y483 593 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PTPRUQ92729 1446 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 TISP43B9A030 160 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PLIN3O60664 434 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SMAD3P84022 425 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 FAM183BPQ6ZVS7 135 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 LRRC70Q7Z2Q7 622 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ERGIC2Q96RQ1 377 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 POLMQ9NP87 494 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 HACD1B0YJ81 288 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 S100A9P06702 114 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF806P0C7X5 589 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PSMD7P51665 324 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ACAP1Q15027 740 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 UBE2R2Q712K3 238 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 UBE2J2Q8N2K1 259 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 ZCCHC7Q8N3Z6 543 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PRCCQ92733 491 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC47A1Q96FL8 570 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 PTPN18Q99952 460 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 C1orf50Q9BV19 199 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 EXD2Q9NVH0 621 aa11.23□□□□□ -0.61
PRPF40A-202ENST00000410080 CLOCKO15516 846 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ASGR1P07306 291 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 S100A1P23297 94 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 GP5P40197 560 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 GPD2P43304 727 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CXCR3P49682 368 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ACLYP53396 1101 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 KCNA10Q16322 511 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CHST9Q7L1S5 443 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 C17orf64Q86WR6 236 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PIH1D2Q8WWB5 315 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 DPYSL5Q9BPU6 564 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC40A1Q9NP59 571 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CLDND1Q9NY35 253 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TIMM8BQ9Y5J9 83 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 NPEPPSL1A6NEC2 478 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SIN3BO75182 1162 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 MLYCDO95822 493 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 FAM58BPP0C7Q3 252 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TIE1P35590 1138 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC6A9P48067 706 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ACTR3P61158 418 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SWI5Q1ZZU3 235 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 DNAJC28Q9NX36 388 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ITGA2P17301 1181 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ARHGAP36Q6ZRI8 547 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 OR52K2Q8NGK3 314 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 LRRC46Q96FV0 321 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PHPT1Q9NRX4 125 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TRMT13Q9NUP7 481 aaKnown RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TLR5O60602 858 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 C22orf31O95567 290 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CYP17A1P05093 508 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 HSDL1Q3SXM5 330 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 DUPD1Q68J44 220 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ZCCHC12Q6PEW1 402 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 OR52E6Q96RD3 313 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 RFXANKO14593 260 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 GSC2O15499 205 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PEX11AO75192 247 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms