RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 WDCPQ9H6R7 721 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 SYNDIG1Q9H7V2 258 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 HOMER3Q9NSC5 361 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ADAM22Q9P0K1 906 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 WHRNQ9P202 907 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 UBR5O95071 2799 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-205ENST00000409542 CCDC187A0A096LP49 1063 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 YY2O15391 372 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 AP1G1O43747 822 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 TCEA3O75764 348 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 HGFP14210 728 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 ITGB6P18564 788 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 SLC5A2P31639 672 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 IGFALSP35858 605 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 SERPINH1P50454 418 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 CSRP3P50461 194 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 CCNHP51946 323 aaPredicted RBP12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 SLC6A3Q01959 620 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 MAMLD1Q13495 774 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 PTK6Q13882 451 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 KRT71Q3SY84 523 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 PTPN20Q4JDL3 420 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 CARD16Q5EG05 197 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 DENND2CQ68D51 928 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 RHOT1Q8IXI2 618 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 PHACTR4Q8IZ21 702 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 OR6K2Q8NGY2 324 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 EXTL1Q92935 676 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 C11orf70Q9BRQ4 267 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 LRRC61Q9BV99 259 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 TRIM7Q9C029 511 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 TSPYL1Q9H0U9 437 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 ZDHHC6Q9H6R6 413 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 SPASTQ9UBP0 616 aa12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 APOBEC3BQ9UH17 382 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 FEZ2Q9UHY8 353 aaPredicted RBP12.8□□□□□ -0.36
CHRNA1-205ENST00000409542 IGLV3-10A0A075B6K4 115 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 AGRPO00253 132 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 CALB1P05937 261 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 ITGA2BP08514 1039 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 ITIH2P19823 946 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 MMP8P22894 467 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 OR1E1P30953 314 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 RECQLP46063 649 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 SULT1E1P49888 294 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 PPP2R2AP63151 447 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 SGCGQ13326 291 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 TCEA2Q15560 299 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 LRRC73Q5JTD7 316 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 CENPTQ96BT3 561 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 PGM2Q96G03 612 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 TBCBQ99426 244 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 TM6SF2Q9BZW4 377 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 CNOT10Q9H9A5 744 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 MBNL1Q9NR56 388 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 PARVAQ9NVD7 372 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 NCKIPSDQ9NZQ3 722 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 ATXN7L1Q9ULK2 861 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 PADI4Q9UM07 663 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 PCDHGC3Q9UN70 934 aa12.79□□□□□ -0.36
CHRNA1-205ENST00000409542 A0A1W2PQM1 296 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 LMO7DNF2Z398 122 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 EBAG9O00559 213 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ANXA6P08133 673 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TSHRP16473 764 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 WT1P19544 449 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CDH5P33151 784 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 UGT1A5P35504 534 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ACVRL1P37023 503 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CCT5P48643 541 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CCL7P80098 99 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 GUCY1A3Q02108 690 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CAV1Q03135 178 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 PTPN13Q12923 2485 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CALCOCO2Q13137 446 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 KLF1Q13351 362 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 SPIDRQ14159 915 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 PPP1R7Q15435 360 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 COLEC12Q5KU26 742 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 BRMS1LQ5PSV4 323 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TRNP1Q6NT89 227 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TRMT10CQ7L0Y3 403 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 FBXO39Q8N4B4 442 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 PCDH20Q8N6Y1 951 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 EXD1Q8NHP7 514 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 BTN2A2Q8WVV5 523 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 NT5C3BQ969T7 300 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms