RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SNRPD1P62314 119 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SULT2A1Q06520 285 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 LMAN2Q12907 356 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 TRAF2Q12933 501 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PRKAA1Q13131 559 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CSHL1Q14406 222 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 DMC1Q14565 340 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 TYSND1Q2T9J0 566 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 TTC31Q49AM3 519 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 AARS2Q5JTZ9 985 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CFAP157Q5JU67 520 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 RBM20Q5T481 1227 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 METTL21CQ5VZV1 264 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PIWIL4Q7Z3Z4 852 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 RNF135Q8IUD6 432 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SLC22A9Q8IVM8 553 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 KIRREL3Q8IZU9 778 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 KIAA1958Q8N8K9 716 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SHKBP1Q8TBC3 707 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 BHMTQ93088 406 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 OTUB2Q96DC9 234 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CNDP1Q96KN2 507 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SAMD11Q96NU1 681 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 NDNQ99608 321 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 TTC1Q99614 292 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 LBHD1Q9BQE6 289 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 LRMDAQ9H2I8 198 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 IGSF5Q9NSI5 407 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 KLC4Q9NSK0 619 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 DNAJC28Q9NX36 388 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 ZDHHC7Q9NXF8 308 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 TAS2R13Q9NYV9 303 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PLK2Q9NYY3 685 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 NCKIPSDQ9NZQ3 722 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 VTI1BQ9UEU0 232 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 HAO1Q9UJM8 370 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 CRYL1Q9Y2S2 319 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 FCF1Q9Y324 198 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 RAP2CQ9Y3L5 183 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PKP3Q9Y446 797 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 PCDHB9Q9Y5E1 797 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 SPO11Q9Y5K1 396 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 COMMD10Q9Y6G5 202 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 MYO16Q9Y6X6 1858 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 DOCK4Q8N1I0 1966 aa6.27□□□□□ -1.41
GTF3C3-202ENST00000409364 OR51F1A6NGY5 319 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 CCL22O00626 93 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 GRM6O15303 877 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 HTRA2O43464 458 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 MGRN1O60291 552 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 NPHS1O60500 1241 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 CLASP2O75122 1294 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 SOCS5O75159 536 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 RFPL2O75678 378 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PGLSO95336 258 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 POP4O95707 220 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 IGSF6O95976 241 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PYGLP06737 847 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 ESRRAP11474 423 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 SNRPBP14678 240 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TCF3P15923 654 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TFEBP19484 476 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 FDXRP22570 491 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TARSP26639 723 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 HMGCLP35914 325 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PTGER3P43115 390 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 IDH3AP50213 366 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 RPL14P50914 215 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 SUOXP51687 545 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 MNAT1P51948 309 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 ADARP55265 1226 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 ELF3P78545 371 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 RAD51Q06609 339 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 DLG1Q12959 904 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 RIPK1Q13546 671 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 RCN2Q14257 317 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 ZNF460Q14592 562 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PTPRCAPQ14761 206 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TEAD2Q15562 447 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 MYLK3Q32MK0 819 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 HSF5Q4G112 596 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PITRM1Q5JRX3 1037 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 CYB5D1Q6P9G0 228 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 NAPRTQ6XQN6 538 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 CERS6Q6ZMG9 384 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 LDB1Q86U70 411 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TMEM25Q86YD3 366 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 CAMK1DQ8IU85 385 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 C7orf61Q8IZ16 206 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 STK40Q8N2I9 435 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TTC30BQ8N4P2 665 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PAF1Q8N7H5 531 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 EFHBQ8N7U6 833 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 OR2AP1Q8NGE2 309 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 WFDC5Q8TCV5 224 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 PIH1D2Q8WWB5 315 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 STON2Q8WXE9 905 aa6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.26□□□□□ -1.41
GTF3C3-202ENST00000409364 SLC7A6OSQ96CW6 309 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms