RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 DDOSTP39656 456 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 RPS9P46781 194 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 PSEN2P49810 448 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 BNC1Q01954 994 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 VAC14Q08AM6 782 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 AQP6Q13520 282 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 SEMA5AQ13591 1074 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 SQLEQ14534 574 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 IER5LQ5T953 404 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 AGAP6Q5VW22 663 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF544Q6NX49 715 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GET4Q7L5D6 327 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 BTLAQ7Z6A9 289 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 DSG4Q86SJ6 1040 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 LYSMD2Q8IV50 215 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 CCDC28AQ8IWP9 274 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 HACE1Q8IYU2 909 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 SPARTQ8N0X7 666 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 TOR1AIP2Q8NFQ8 470 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 ZFP90Q8TF47 636 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 PPWD1Q96BP3 646 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 AGAP4Q96P64 663 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 CPNE1Q99829 537 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 HOPXQ9BPY8 73 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 TRAF4Q9BUZ4 470 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 SLC25A23Q9BV35 468 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 KIFC3Q9BVG8 833 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 FUNDC2Q9BWH2 189 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 MUC3BQ9H195 1237 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 LRRC40Q9H9A6 602 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GPRC5CQ9NQ84 441 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 MTMR10Q9NXD2 777 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 ACTR3BQ9P1U1 418 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 ABCD2Q9UBJ2 740 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 GRIP1Q9Y3R0 1128 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 COPG1Q9Y678 874 aaKnown RBP10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 MAU2Q9Y6X3 613 aa10.64□□□□□ -0.71
NIF3L1-204ENST00000409357 RNF103-CHMP3A0A140T963 221 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 DHRS12A0PJE2 317 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 OR5K3A6NET4 321 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 STX16-NPEPL1H3BU86 382 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 HAX1O00165 279 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 BET1O15155 118 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 LRCH4O75427 683 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TIPRLO75663 272 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 HPRP00739 348 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 C4BPAP04003 597 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 LGALS2P05162 132 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 NR4A1P22736 598 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CRHBPP24387 322 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GP5P40197 560 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CLK3P49761 638 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PPP2R2BQ00005 443 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TAGLNQ01995 201 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TARDBPQ13148 414 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PPIGQ13427 754 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■■■■□ 25.5
NIF3L1-204ENST00000409357 POU6F1Q14863 301 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CEP78Q5JTW2 689 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TRMT10BQ6PF06 316 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 METTL7BQ6UX53 244 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF534Q76KX8 674 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 OTOP2Q7RTS6 562 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 DEFB128Q7Z7B8 93 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SLCO6A1Q86UG4 719 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 RFX6Q8HWS3 928 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TBC1D21Q8IYX1 336 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GPD1LQ8N335 351 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 OR6F1Q8NGZ6 308 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZSCAN18Q8TBC5 510 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CANT1Q8WVQ1 401 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF606Q8WXB4 792 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CEP170P1Q96L14 293 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF560Q96MR9 790 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 MCEEQ96PE7 176 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ASB2Q96Q27 587 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TWNKQ96RR1 684 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GPR20Q99678 358 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GATA5Q9BWX5 397 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 RHOBTB2Q9BYZ6 727 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SNX25Q9H3E2 840 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 LRRC4Q9HBW1 653 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SYTL2Q9HCH5 934 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 IL23AQ9NPF7 189 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 EIF2B3Q9NR50 452 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GTF2IRD1Q9UHL9 959 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF229Q9UJW7 825 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF221Q9UK13 617 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TBX20Q9UMR3 447 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TMA7Q9Y2S6 64 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SIP14410 1827 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PIK3R2O00459 728 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms