RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 YPEL5P62699 121 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 STPG1Q5TH74 334 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 TTC27Q6P3X3 843 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 NYAP1Q6ZVC0 841 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 CREG2Q8IUH2 290 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 ATL2Q8NHH9 583 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 TBL1YQ9BQ87 522 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 TRABDQ9H4I3 376 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 LRRC40Q9H9A6 602 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 HACD3Q9P035 362 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 SHOC2Q9UQ13 582 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 SPO11Q9Y5K1 396 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 C4orf47A7E2U8 309 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 ERI2A8K979 691 aaKnown RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 DFNA5O60443 496 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 AP2A1O95782 977 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 ZSCAN5DPP0CG00 497 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 CASQ1P31415 396 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 RPL22P35268 128 aaKnown RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 COILP38432 576 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 DPTQ07507 201 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 OLIG2Q13516 323 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 INPP5AQ14642 412 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 CCDC137Q6PK04 289 aaKnown RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 C4orf22Q6V702 233 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 SYT10Q6XYQ8 523 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 RFLNAQ6ZTI6 216 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 ZNF765Q7L2R6 523 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 TMC3Q7Z5M5 1100 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 NRSN1Q8IZ57 195 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 OXR1Q8N573 874 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 TAB3Q8N5C8 712 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 PDCD7Q8N8D1 485 aaKnown RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 PLA2G15Q8NCC3 412 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 EID2BQ96D98 161 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 CAPZA3Q96KX2 299 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 ELF4Q99607 663 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 APOL2Q9BQE5 337 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 GPR63Q9BZJ6 419 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 IL21RQ9HBE5 538 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 ETNK1Q9HBU6 452 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 ARNT2Q9HBZ2 717 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 PKD2L2Q9NZM6 624 aa20.27■□□□□ 0.84
PTCD3-202ENST00000409326 FNDC3AQ9Y2H6 1198 aaKnown RBP20.27■□□□□ 0.84
PTCD3-202ENST00000409326 RGSL1A5PLK6 1076 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 USP12O75317 370 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 ZNF883P0CG24 379 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 TSHRP16473 764 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 SPINT3P49223 89 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 FNTAP49354 379 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 SEMA5AQ13591 1074 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 PDE1CQ14123 709 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-202ENST00000409326 SPARCL1Q14515 664 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 PNCKQ6P2M8 343 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 NLRP8Q86W28 1048 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 PELI3Q8N2H9 469 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 AP2M1Q96CW1 435 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 APOOQ9BUR5 198 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 ABCG8Q9H221 673 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 RAB6BQ9NRW1 208 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 RNF14Q9UBS8 474 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 FEZ2Q9UHY8 353 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-202ENST00000409326 CD84Q9UIB8 345 aa20.26■□□□□ 0.83
PTCD3-202ENST00000409326 SPTY2D1-AS1A0A0U1RR47 76 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 A0A1B0GTQ1 180 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 K7ESM1 405 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 AURKAO14965 403 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 SLC4A1P02730 911 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 TEAD1P28347 426 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 TRIM23P36406 574 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 CCT8P50990 548 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 THOP1P52888 689 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 PTK2BQ14289 1009 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 FZD2Q14332 565 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 TPRG1LQ5T0D9 272 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 DENND5AQ6IQ26 1287 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 MACC1Q6ZN28 852 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 GLT6D1Q7Z4J2 308 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 BLOC1S5Q8TDH9 187 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 C16orf45Q96MC5 204 aaPredicted RBP20.25■□□□□ 0.83
PTCD3-202ENST00000409326 NFKBIL1Q9UBC1 381 aaPredicted RBP20.25■□□□□ 0.83
PTCD3-202ENST00000409326 CDV3Q9UKY7 258 aaKnown RBP20.25■□□□□ 0.83
PTCD3-202ENST00000409326 OR1A2Q9Y585 309 aa20.25■□□□□ 0.83
PTCD3-202ENST00000409326 E7EVH7 732 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 YKT6O15498 198 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 SUN1O94901 812 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 PYGLP06737 847 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 HMGCLP35914 325 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 RXRGP48443 463 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 ARRB1P49407 418 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-202ENST00000409326 KIAA1024LP59773 190 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 DCDC1P59894 354 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 NFATC4Q14934 902 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 RAET1GQ6H3X3 334 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 LINC00523Q86TU6 105 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 PARGQ86W56 976 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 TTC30BQ8N4P2 665 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 GRK7Q8WTQ7 553 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 SCAMP4Q969E2 229 aa20.24■□□□□ 0.83
PTCD3-202ENST00000409326 FUBP1Q96AE4 644 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms