RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.33
SMARCB1-203ENST00000407082 OBSL1O75147 1896 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 A0A087X1B8 175 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 HEATR9A2RTY3 570 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 I6L893 689 aaPredicted RBP12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 SIN3BO75182 1162 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 PAPSS2O95340 614 aaPredicted RBP12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 CBX6O95503 412 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 PRAMEF12O95522 483 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 OLFM2O95897 454 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 PRDX6P30041 224 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 WEE1P30291 646 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 SERPINB5P36952 375 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 EFEMP1Q12805 493 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 CERCAMQ5T4B2 595 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 KIAA0930Q6ICG6 404 aaPredicted RBP12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 KLHDC10Q6PID8 442 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TXNDC11Q6PKC3 985 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 RAPH1Q70E73 1250 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TTC16Q8NEE8 873 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 GIMAP7Q8NHV1 300 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TSPAN17Q96FV3 270 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC39A13Q96H72 371 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 VPS39Q96JC1 886 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TRPV4Q9HBA0 871 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 ARNT2Q9HBZ2 717 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 SMPD4Q9NXE4 827 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 SFMBT1Q9UHJ3 866 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC8A2Q9UPR5 921 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 DNAJC16Q9Y2G8 782 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 TCAF1Q9Y4C2 921 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 CPQQ9Y646 472 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
SMARCB1-203ENST00000407082 GSC2O15499 205 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 USP12O75317 370 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 HSPA4LO95757 839 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 C2P06681 752 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ALOX15P16050 662 aaPredicted RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 MAPKAPK2P49137 400 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 PAPOLAP51003 745 aaKnown RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CCNG1P51959 295 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC7A9P82251 487 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CREB5Q02930 508 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 TNK2Q07912 1038 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 USP10Q14694 798 aaKnown RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 PCLAFQ15004 111 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 PARP15Q460N3 678 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 MARC1Q5VT66 337 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CES3Q6UWW8 571 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 GALNT7Q86SF2 657 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CLEC14AQ86T13 490 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 MIB1Q86YT6 1006 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 TP53INP2Q8IXH6 220 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 UNC5BQ8IZJ1 945 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 AFAP1L2Q8N4X5 818 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 TEX9Q8N6V9 391 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CNTD1Q8N815 330 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 IPMKQ8NFU5 416 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 USP33Q8TEY7 942 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 AGAP11Q8TF27 550 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 PDCD6IPQ8WUM4 868 aaKnown RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 SCG3Q8WXD2 468 aaKnown RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ZCCHC14Q8WYQ9 949 aaKnown RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 USP13Q92995 863 aaPredicted RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 STMN2Q93045 179 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 COL26A1Q96A83 441 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CMTM5Q96DZ9 223 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CCDC126Q96EE4 140 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ZFYVE19Q96K21 471 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 EDEM2Q9BV94 578 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 FICDQ9BVA6 458 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 SCNM1Q9BWG6 230 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ILKAPQ9H0C8 392 aaPredicted RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 RNPEPL1Q9HAU8 725 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 SP110Q9HB58 689 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CHRAC1Q9NRG0 131 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 GKN1Q9NS71 199 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ARL8BQ9NVJ2 186 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 TMEM216Q9P0N5 145 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 VTI1BQ9UEU0 232 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 EMCNQ9ULC0 261 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ARHGAP26Q9UNA1 814 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 ACOT9Q9Y305 439 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 SNX10Q9Y5X0 201 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 PSAT1Q9Y617 370 aa12.94□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 TMEM8BA6NDV4 472 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 MOCS2O96007 188 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms