RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TLX3O43711 291 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 NDST3O95803 873 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 MT-CYBP00156 380 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 KRT14P02533 472 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 MMP2P08253 660 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 ACSL1P33121 698 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 EIF2S3P41091 472 aaKnown RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 METAP1P53582 386 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 WNT3AP56704 352 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 RPS21P63220 83 aaKnown RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 ARHGEF7Q14155 803 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 SMAD1Q15797 465 aaKnown RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 KIAA1161Q6NSJ0 714 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 KDELC2Q7Z4H8 507 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 LINC00523Q86TU6 105 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 KLHL7Q8IXQ5 586 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 SPATA4Q8NEY3 305 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 LPCAT1Q8NF37 534 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 FAM131CQ96AQ9 280 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 NXPE2Q96DL1 559 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 SCRN2Q96FV2 425 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 MLPHQ9BV36 600 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 C1QTNF7Q9BXJ2 289 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 DDX47Q9H0S4 455 aaKnown RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 PCDH12Q9NPG4 1184 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 UBP1Q9NZI7 540 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 PCYOX1Q9UHG3 505 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 FADS3Q9Y5Q0 445 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 CKAP5Q14008 2032 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 A0A0J9YYE9 177 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 ANKRD66B4E2M5 251 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 AP3B1O00203 1094 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 NDC80O14777 642 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 AREL1O15033 823 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 ZNF500O60304 480 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 FZD6O60353 706 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 FSBPO95073 299 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 TRBC1P01850 177 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 FGF1P05230 155 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 RPL22P35268 128 aaKnown RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 CCR5P51681 352 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 BASP1P80723 227 aaKnown RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 DR1Q01658 176 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 BNC1Q01954 994 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 GPS1Q13098 491 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 SGCGQ13326 291 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 DHX34Q14147 1143 aaKnown RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 HLA-BQ31612 363 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 SETMARQ53H47 684 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 KIAA0895LQ68EN5 471 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 NAPEPLDQ6IQ20 393 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 TTC27Q6P3X3 843 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 PCSK4Q6UW60 755 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 GPR155Q7Z3F1 870 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 HORMAD1Q86X24 394 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 SNX19Q92543 992 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 SLCO2A1Q92959 643 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 TADA1Q96BN2 335 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 OXNAD1Q96HP4 312 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-204ENST00000405578 KCTD5Q9NXV2 234 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 ASIC3Q9UHC3 531 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 PCDHGB2Q9Y5G2 931 aa10.57□□□□□ -0.72
RPAIN-204ENST00000405578 TEX51A0A1B0GUA7 166 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 LOC285095A0A1B0GVY8 99 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 A0A1W2PQU0 124 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 CTAGE15A4D2H0 777 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 PDE2AO00408 941 aaPredicted RBP10.56□□□□□ -0.72
RPAIN-204ENST00000405578 RRP8O43159 456 aaKnown RBP10.56□□□□□ -0.72
RPAIN-204ENST00000405578 LZTS3O60299 673 aaPredicted RBP10.56□□□□□ -0.72
RPAIN-204ENST00000405578 RNGTTO60942 597 aaKnown RBP10.56□□□□□ -0.72
RPAIN-204ENST00000405578 METTL18O95568 372 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 AP2A1O95782 977 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 APRTP07741 180 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 PDHA1P08559 390 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 ELFN1P0C7U0 828 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 CTAGE8P0CG41 777 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 ZNF30P17039 623 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 VIPR1P32241 457 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 MMP12P39900 470 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 ADCY8P40145 1251 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 ABL2P42684 1182 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 TAS2R38P59533 333 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 CDK16Q00536 496 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 SEMG2Q02383 582 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 SEMA5AQ13591 1074 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 GALNT3Q14435 633 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 TRIP13Q15645 432 aaPredicted RBP10.56□□□□□ -0.72
RPAIN-204ENST00000405578 TMEM52BQ4KMG9 183 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 LRRC73Q5JTD7 316 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 KDELC1Q6UW63 502 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 IL27RAQ6UWB1 636 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 PPP1R21Q6ZMI0 780 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 DPPA4Q7L190 304 aa10.56□□□□□ -0.72
RPAIN-204ENST00000405578 CTAGE6Q86UF2 777 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms