RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CCDC25Q86WR0 208 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 CADM4Q8NFZ8 388 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 TRIM56Q9BRZ2 755 aaKnown RBP33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 PKD2L2Q9NZM6 624 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 WNT9AO14904 365 aa33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 CCR5P51681 352 aa33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 TMPRSS15P98073 1019 aa33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 KIFC1Q9BW19 673 aa33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 MTRF1LQ9UGC7 380 aaKnown RBP33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 SOX13Q9UN79 622 aa33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 ZBTB32Q9Y2Y4 487 aaPredicted RBP33.23■■■□□ 2.91
CSNK1E-204ENST00000403904 E7ESA3 106 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 SLC31A1O15431 190 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 LATO43561 262 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 BPIP17213 487 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 CREB5Q02930 508 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 LAMB3Q13751 1172 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 FASTKD3Q14CZ7 662 aaKnown RBP33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 TSTD2Q5T7W7 516 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 CES3Q6UWW8 571 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 IGDCC3Q8IVU1 814 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 DTD2Q96FN9 168 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 DNAJC1Q96KC8 554 aaKnown RBP33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 FMO2Q99518 471 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 EBF2Q9HAK2 575 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 SLC2A6Q9UGQ3 507 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 FNDC3AQ9Y2H6 1198 aaKnown RBP33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 PCDHGA2Q9Y5H1 932 aa33.22■■■□□ 2.91
CSNK1E-204ENST00000403904 METTL12A8MUP2 240 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 CCL22O00626 93 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 CNR2P34972 360 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 ELK3P41970 407 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 ANKMY2Q8IV38 441 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 SLC41A1Q8IVJ1 513 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 STYXQ8WUJ0 223 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 PTCD2Q8WV60 388 aaKnown RBP33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 SNX19Q92543 992 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 STAMBPL1Q96FJ0 436 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 WDR83Q9BRX9 315 aaKnown RBP33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 FOXP3Q9BZS1 431 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 PCED1AQ9H1Q7 454 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 SAYSD1Q9NPB0 183 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 CHMP2BQ9UQN3 213 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 TEX264Q9Y6I9 313 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 GON4LQ3T8J9 2241 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 DMDP11532 3685 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 NMBRP28336 390 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 GSPT2Q8IYD1 628 aaKnown RBP33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 ZBED8Q8IZ13 594 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 GPR26Q8NDV2 337 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 RUBCNQ92622 972 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 SCAMP4Q969E2 229 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 NUS1Q96E22 293 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 HSPA12BQ96MM6 686 aa33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 EBNA1BP2Q99848 306 aaKnown RBP33.21■■■□□ 2.91
CSNK1E-204ENST00000403904 MAGEB16A2A368 324 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 MYBL2P10244 700 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 SKIDA1Q1XH10 827 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 ESRP1Q6NXG1 681 aaKnown RBP33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 LPCAT2Q7L5N7 544 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 NLRP9Q7RTR0 991 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 CYP2U1Q7Z449 544 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 C11orf74Q86VG3 221 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 LRRC39Q96DD0 335 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 MFSD3Q96ES6 412 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 DUSP15Q9H1R2 295 aaPredicted RBP33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 MRM3Q9HC36 420 aaKnown RBP33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 FZD3Q9NPG1 666 aa33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 NLE1Q9NVX2 485 aaPredicted RBP33.2■■■□□ 2.91
CSNK1E-204ENST00000403904 SPAG17Q6Q759 2223 aa33.2■■■□□ 2.9
CSNK1E-204ENST00000403904 SDK1Q7Z5N4 2213 aa33.2■■■□□ 2.9
CSNK1E-204ENST00000403904 PLXNA2O75051 1894 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 VSNL1P62760 191 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 CBLBQ13191 982 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 AGERQ15109 404 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 SETMARQ53H47 684 aaPredicted RBP33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 ALS2CLQ60I27 953 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 CEP68Q76N32 757 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 ARMCX6Q7L4S7 300 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 OR13J1Q8NGT2 312 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 MYOCQ99972 504 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 ABCG8Q9H221 673 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 FKBPLQ9UIM3 349 aa33.19■■■□□ 2.9
CSNK1E-204ENST00000403904 MYO15AQ9UKN7 3530 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 RAD51BO15315 384 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 EIF3HO15372 352 aaKnown RBP eCLIP33.18■■■□□ 2.92e-8■□□□□ 9.9
CSNK1E-204ENST00000403904 RAVER1Q8IY67 606 aaKnown RBP33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 NRSN1Q8IZ57 195 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 GPR161Q8N6U8 529 aaKnown RBP33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 FBXO36Q8NEA4 188 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 ASB12Q8WXK4 309 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 FOXJ1Q92949 421 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 AP2M1Q96CW1 435 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 FAM83DQ9H4H8 585 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 RPS6KL1Q9Y6S9 549 aa33.18■■■□□ 2.9
CSNK1E-204ENST00000403904 FAM237BA0A1B0GVD1 139 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 RGSL1A5PLK6 1076 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 MEI4A8MW99 385 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 LILRB5O75023 590 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 TNFRSF8P28908 595 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms