RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MYF6P23409 242 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 PON1P27169 355 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 ME1P48163 572 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SSBP2P81877 361 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 ACSM2AQ08AH3 577 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 PCLAFQ15004 111 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 TMEM266Q2M3C6 531 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 IGSF11Q5DX21 431 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 PAPPA-AS1Q5QFB9 102 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 ACSM2BQ68CK6 577 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 NCAPH2Q6IBW4 605 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 COLCA1Q6ZS62 124 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 DENND5BQ6ZUT9 1274 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SHFQ7M4L6 423 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 TRAPPC11Q7Z392 1133 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SDCCAG8Q86SQ7 713 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SPATA6LQ8N4H0 392 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 KCTD6Q8NC69 237 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 BICD2Q8TD16 824 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 ASB5Q8WWX0 329 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 TRIB2Q92519 343 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 PGAM5Q96HS1 289 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 HAUS8Q9BT25 410 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 TXLNGYQ9BZA5 131 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SEBOXQ9HB31 216 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 LTB4R2Q9NPC1 389 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 KRCC1Q9NPI7 259 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 CDC14AQ9UNH5 594 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 SRPRBQ9Y5M8 271 aaKnown RBP3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 FAM169AQ9Y6X4 670 aa3.95□□□□□ -1.78
HMGB1P17-201ENST00000403495 A0A1W2PR77 199 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 B4DGG1 531 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 MS4A18H0YCH9 400 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 TNFRSF13BO14836 293 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 ADAMDEC1O15204 470 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 OGG1O15527 345 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 NDUFB4O95168 129 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 PSG1P11464 419 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 HOXB2P14652 356 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 MMP9P14780 707 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 ARSBP15848 533 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 IL11P20809 199 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 GNLYP22749 145 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 CD38P28907 300 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 HSD17B4P51659 736 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 RRP1P56182 461 aaKnown RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 TAS2R40P59535 323 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 ECT2LQ008S8 904 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 AIMP2Q13155 320 aaKnown RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 RASA2Q15283 850 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 SHBQ15464 509 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 EFNB3Q15768 340 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 SMN1Q16637 294 aaKnown RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 SLC30A6Q6NXT4 461 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 RPUSD3Q6P087 351 aaKnown RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 PDXDC1Q6P996 788 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 PATL1Q86TB9 770 aaKnown RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 FOXRED2Q8IWF2 684 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 CCDC191Q8NCU4 936 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 AGBL3Q8NEM8 1001 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 DENND1AQ8TEH3 1009 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 GRAMD2BQ96HH9 432 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 EGLN2Q96KS0 407 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 GCNAQ96QF7 691 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 SMC6Q96SB8 1091 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 APOL6Q9BWW8 343 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 FAM234AQ9H0X4 552 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 SIL1Q9H173 461 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 HRH4Q9H3N8 390 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLAC1Q9HBJ0 212 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 NOX4Q9NPH5 578 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 ACSS1Q9NUB1 689 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 MTMR10Q9NXD2 777 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 ELOVL5Q9NYP7 299 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 CMAHPQ9Y471 501 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZNF804BA4D1E1 1349 aa3.94□□□□□ -1.78
HMGB1P17-201ENST00000403495 LY6G6EA0A0G2JKS1 128 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 RPS10-NUDT3A0A1W2PQS6 291 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 GAGE12JA6NER3 117 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 INAFM1C9JVW0 142 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SCAMP1O15126 338 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 PAPSS1O43252 624 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 HSPA12AO43301 675 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 RGS14O43566 566 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 JRKO75564 520 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 EGFP01133 1207 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 ICAM1P05362 532 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 NR2F1P10589 423 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 NAGAP17050 411 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 TMEM11P17152 192 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SAT1P21673 171 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 CHATP28329 748 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 HOXA11P31270 313 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 ENTPD1P49961 510 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 PPP5CP53041 499 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 C21orf58P58505 322 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZP1P60852 638 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 PPP2R2BQ00005 443 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 NEDD9Q14511 834 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 FNBP1LQ5T0N5 605 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms