RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TBC1D30Q9Y2I9 924 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 PIPSLA2A3N6 862 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CCL16O15467 120 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 COL6A2P12110 1019 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 WARSP23381 471 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 PDK3Q15120 406 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 HEATR4Q86WZ0 1026 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CIR1Q86X95 450 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 PTCD2Q8WV60 388 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 LPIN3Q9BQK8 851 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 DAPK2Q9UIK4 370 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 PRPF19Q9UMS4 504 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 LYVE1Q9Y5Y7 322 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 ACSL4O60488 711 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 NR2F1P10589 423 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 ITPKAP23677 461 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 HTR1BP28222 390 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 PURAQ00577 322 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 GK5Q6ZS86 529 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CLNKQ7Z7G1 428 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 RAVER1Q8IY67 606 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 OR7D4Q8NG98 312 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 FERD3LQ96RJ6 166 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 C3orf18Q9UK00 162 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 TK2O00142 265 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CST1P01037 141 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 HADHBP55084 474 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 PCDH19Q8TAB3 1148 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 OSBPL6Q9BZF3 934 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 VPS4AQ9UN37 437 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 A0A0J9YYE9 177 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 KCNU1A8MYU2 1149 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 HTR7P34969 479 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CDC42P60953 191 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 GNA12Q03113 381 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 ENPEPQ07075 957 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 DGUOKQ16854 277 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 GPAT3Q53EU6 434 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 VARS2Q5ST30 1063 aaKnown RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 SH3PXD2AQ5TCZ1 1133 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 RINLQ6ZS11 566 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 TMEM192Q8IY95 271 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CLEC4CQ8WTT0 213 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 CLIP3Q96DZ5 547 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 HMCESQ96FZ2 354 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 SLC25A51Q9H1U9 297 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 ZFP37Q9Y6Q3 630 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-204ENST00000400337 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
COL18A1-204ENST00000400337 MATN3O15232 486 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 GDF10P55107 478 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 TRAF3Q13114 568 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 KLF10Q13118 480 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CLP1Q92989 425 aaKnown RBP18.16■□□□□ 0.5
COL18A1-204ENST00000400337 GPR21Q99679 349 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 GMPPBQ9Y5P6 360 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 YJEFN3A6XGL0 299 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 NRP2O60462 931 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 STBD1O95210 358 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 COPZ1P61923 177 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 PDZK1Q5T2W1 519 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CLHC1Q8NHS4 586 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 ZNF516Q92618 1163 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 ITCHQ96J02 903 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CORO2BQ9UQ03 480 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 POLR1DQ9Y2S0 133 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 TCAF1Q9Y4C2 921 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 ZW10O43264 779 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 LIMK2P53671 638 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CSNK2BP67870 215 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CDC73Q6P1J9 531 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CYP4X1Q8N118 509 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 STYXQ8WUJ0 223 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 ASZ1Q8WWH4 475 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 RTKNQ9BST9 563 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 AASDHPPTQ9NRN7 309 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 PCDHGC4Q9Y5F7 938 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 M0R2N6 131 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 SYN3O14994 580 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 FAM20CQ8IXL6 584 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 TSPAN14Q8NG11 270 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 FZD10Q9ULW2 581 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
COL18A1-204ENST00000400337 TRIM43BA6NCK2 446 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 NDUFS2O75306 463 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 ZNHIT3Q15649 155 aaPredicted RBP18.16■□□□□ 0.5
COL18A1-204ENST00000400337 TRIQKQ629K1 86 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 OTOP2Q7RTS6 562 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 C16orf62Q7Z3J2 963 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 FAM124AQ86V42 546 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 CPNE8Q86YQ8 564 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 VPS35Q96QK1 796 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
COL18A1-204ENST00000400337 SATB2Q9UPW6 733 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 PCDHB1Q9Y5F3 818 aa18.16■□□□□ 0.5
COL18A1-204ENST00000400337 SIGLEC1Q9BZZ2 1709 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 LOC100506127A0A0U1RQW1 187 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 PGM3O95394 542 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 PSMD7P51665 324 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms